Information for 11-CACAGAGAAAACCACA (Motif 21)

A G T C G T C A A G T C C G T A A C T G C G T A C T A G C G T A C G T A C T G A G T C A A G T C A G T C C G T A A G T C C G T A
Reverse Opposite:
G C A T A C T G A C G T C T A G C T A G A C G T A G C T A C G T A C G T A G T C A C G T A G T C A C G T A C T G A C G T A C T G
p-value:1e-3
log p-value:-7.204e+00
Information Content per bp:1.893
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.2 +/- 21.0bp
Average Position of motif in Background37.0 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.64
Offset:8
Orientation:forward strand
Alignment:CACAGAGAAAACCACA--
--------AAACCACANN
A G T C G T C A A G T C C G T A A C T G C G T A C T A G C G T A C G T A C T G A G T C A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:CACAGAGAAAACCACA---
--------AAACCACAGAN
A G T C G T C A A G T C C G T A A C T G C G T A C T A G C G T A C G T A C T G A G T C A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.62
Offset:7
Orientation:forward strand
Alignment:CACAGAGAAAACCACA---
-------NWAACCACADNN
A G T C G T C A A G T C C G T A A C T G C G T A C T A G C G T A C G T A C T G A G T C A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.62
Offset:7
Orientation:forward strand
Alignment:CACAGAGAAAACCACA-
-------NAAACCACAG
A G T C G T C A A G T C C G T A A C T G C G T A C T A G C G T A C G T A C T G A G T C A A G T C A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:CACAGAGAAAACCACA--
--------AAACCACAGC
A G T C G T C A A G T C C G T A A C T G C G T A C T A G C G T A C G T A C T G A G T C A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.56
Offset:8
Orientation:forward strand
Alignment:CACAGAGAAAACCACA--
--------AAACCGCAAA
A G T C G T C A A G T C C G T A A C T G C G T A C T A G C G T A C G T A C T G A G T C A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.55
Offset:8
Orientation:forward strand
Alignment:CACAGAGAAAACCACA-
--------AAACCGCAA
A G T C G T C A A G T C C G T A A C T G C G T A C T A G C G T A C G T A C T G A G T C A A G T C A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

GATA3/MA0037.2/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CACAGAGAAAACCACA
---AGATAAGA-----
A G T C G T C A A G T C C G T A A C T G C G T A C T A G C G T A C G T A C T G A G T C A A G T C A G T C C G T A A G T C C G T A
A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CACAGAGAAAACCACA--
AGTAAACAAAAAAGAACANN
A C G T A C G T A G T C G T C A A G T C C G T A A C T G C G T A C T A G C G T A C G T A C T G A G T C A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

Gata1/MA0035.3/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CACAGAGAAAACCACA
-ANAGATAAGAA----
A G T C G T C A A G T C C G T A A C T G C G T A C T A G C G T A C G T A C T G A G T C A A G T C A G T C C G T A A G T C C G T A
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T