Information for 10-MCKGMMACCKSYCRAC (Motif 19)

G T C A A G T C A C G T C T A G G T A C G T C A C G T A A G T C A G T C A C G T A T G C A G T C A G T C C T G A C G T A A G T C
Reverse Opposite:
A C T G A C G T A G C T A C T G C T A G A T C G G T C A C T A G A C T G A C G T A C G T A C T G A G T C G T C A A C T G A C G T
p-value:1e-5
log p-value:-1.307e+01
Information Content per bp:1.803
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.3 +/- 10.1bp
Average Position of motif in Background69.2 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX2/MA0783.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:MCKGMMACCKSYCRAC
--TGACACCTGTCA--
 G T C A A G T C A C G T C T A G G T A C G T C A C G T A A G T C A G T C A C G T A T G C A G T C A G T C C T G A C G T A A G T C
A C G T A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:MCKGMMACCKSYCRAC
--TGACACCTGTCA--
 G T C A A G T C A C G T C T A G G T A C G T C A C G T A A G T C A G T C A C G T A T G C A G T C A G T C C T G A C G T A A G T C
A C G T A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:MCKGMMACCKSYCRAC
ACTGAAACCA------
 G T C A A G T C A C G T C T A G G T A C G T C A C G T A A G T C A G T C A C G T A T G C A G T C A G T C C T G A C G T A A G T C
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:MCKGMMACCKSYCRAC
--TGACAGCTGTCA--
 G T C A A G T C A C G T C T A G G T A C G T C A C G T A A G T C A G T C A C G T A T G C A G T C A G T C C T G A C G T A A G T C
A C G T A C G T G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---MCKGMMACCKSYCRAC
ATAAATGACACCTATCA--
 A C G T A C G T A C G T G T C A A G T C A C G T C T A G G T A C G T C A C G T A A G T C A G T C A C G T A T G C A G T C A G T C C T G A C G T A A G T C
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:MCKGMMACCKSYCRAC--
--AAAGACCTGTCAATCC
 G T C A A G T C A C G T C T A G G T A C G T C A C G T A A G T C A G T C A C G T A T G C A G T C A G T C C T G A C G T A A G T C A C G T A C G T
A C G T A C G T C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:MCKGMMACCKSYCRAC
----NCACCTGTN---
 G T C A A G T C A C G T C T A G G T A C G T C A C G T A A G T C A G T C A C G T A T G C A G T C A G T C C T G A C G T A A G T C
A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:MCKGMMACCKSYCRAC
--TGACAGCTGTCA--
 G T C A A G T C A C G T C T A G G T A C G T C A C G T A A G T C A G T C A C G T A T G C A G T C A G T C C T G A C G T A A G T C
A C G T A C G T G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:MCKGMMACCKSYCRAC
--SNGCACCTGCHS--
 G T C A A G T C A C G T C T A G G T A C G T C A C G T A A G T C A G T C A C G T A T G C A G T C A G T C C T G A C G T A A G T C
A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:MCKGMMACCKSYCRAC--
--AAAGACCTGTCAATAC
 G T C A A G T C A C G T C T A G G T A C G T C A C G T A A G T C A G T C A C G T A T G C A G T C A G T C C T G A C G T A A G T C A C G T A C G T
A C G T A C G T G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C