Information for 6-GTCATTACCC (Motif 26)

A C T G C A G T A G T C C G T A C G A T C A G T C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G C T A G A C G T G T C A C G T A A C G T A C T G G T C A A G T C
p-value:1e-5
log p-value:-1.331e+01
Information Content per bp:1.850
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif65.5
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets57.1 +/- 25.2bp
Average Position of motif in Background51.4 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTCATTACCC
-YCATTAMC-
 A C T G C A G T A G T C C G T A C G A T C A G T C G T A A G T C A G T C A G T C
A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GTCATTACCC
GARTGGTCATCGCCC
 A C G T A C G T A C G T A C G T A C G T A C T G C A G T A G T C C G T A C G A T C A G T C G T A A G T C A G T C A G T C
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C

HOXA2/MA0900.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTCATTACCC
CCTAATTACC-
 A C G T A C T G C A G T A G T C C G T A C G A T C A G T C G T A A G T C A G T C A G T C
T A G C T A G C G A C T T G C A T C G A A C G T G A C T G C T A T A G C T A G C A C G T

EVX1/MA0887.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTCATTACCC
GGTAATTAGC-
 A C G T A C T G C A G T A G T C C G T A C G A T C A G T C G T A A G T C A G T C A G T C
T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C A C G T

PH0061.1_Hoxb6/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTCATTACCC---
NNNGTAATTACNNATA
 A C G T A C G T A C G T A C T G C A G T A G T C C G T A C G A T C A G T C G T A A G T C A G T C A G T C A C G T A C G T A C G T
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTCATTACCC--
AGGTCANTGACCTN
 A C G T A C G T A C T G C A G T A G T C C G T A C G A T C A G T C G T A A G T C A G T C A G T C A C G T A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

EVX2/MA0888.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTCATTACCC
GGTAATTAGC-
 A C G T A C T G C A G T A G T C C G T A C G A T C A G T C G T A A G T C A G T C A G T C
T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTCATTACCC
GTCATN----
 A C T G C A G T A G T C C G T A C G A T C A G T C G T A A G T C A G T C A G T C
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T

MEOX1/MA0661.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTCATTACCC
GCTAATTAAC-
 A C G T A C T G C A G T A G T C C G T A C G A T C A G T C G T A A G T C A G T C A G T C
T C A G T A G C G A C T T G C A C G T A G A C T A C G T C T G A G T C A T A G C A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GTCATTACCC--
GGAGGTCATTAATTAT
 A C G T A C G T A C G T A C G T A C T G C A G T A G T C C G T A C G A T C A G T C G T A A G T C A G T C A G T C A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T