Information for 2-AACWSTGKSTTMTCCA (Motif 2)

C G T A C G T A A G T C C G A T A T C G A C G T C T A G A C G T A T C G A C G T A C G T G T C A A C G T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G T A A C G T C G T A C G T A T A G C G T C A A G T C C G T A T A C G C G T A C T A G A C G T A C G T
p-value:1e-13
log p-value:-3.102e+01
Information Content per bp:1.860
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.4 +/- 33.1bp
Average Position of motif in Background24.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.59
Offset:9
Orientation:forward strand
Alignment:AACWSTGKSTTMTCCA
---------TTTTCCA
C G T A C G T A A G T C C G A T A T C G A C G T C T A G A C G T A T C G A C G T A C G T G T C A A C G T A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AACWSTGKSTTMTCCA
GAACADWATGTTCTT--
A C G T C G T A C G T A A G T C C G A T A T C G A C G T C T A G A C G T A T C G A C G T A C G T G T C A A C G T A G T C A G T C C G T A
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.55
Offset:8
Orientation:forward strand
Alignment:AACWSTGKSTTMTCCA--
--------ATTTTCCATT
C G T A C G T A A G T C C G A T A T C G A C G T C T A G A C G T A T C G A C G T A C G T G T C A A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AACWSTGKSTTMTCCA
GRACAGWMTGTYCTB--
A C G T C G T A C G T A A G T C C G A T A T C G A C G T C T A G A C G T A T C G A C G T A C G T G T C A A C G T A G T C A G T C C G T A
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AACWSTGKSTTMTCCA
GVACAGNMTGTYCTB--
A C G T C G T A C G T A A G T C C G A T A T C G A C G T C T A G A C G T A T C G A C G T A C G T G T C A A C G T A G T C A G T C C G T A
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AACWSTGKSTTMTCCA-
-----TGAATTATGCAT
C G T A C G T A A G T C C G A T A T C G A C G T C T A G A C G T A T C G A C G T A C G T G T C A A C G T A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.52
Offset:8
Orientation:forward strand
Alignment:AACWSTGKSTTMTCCA--
--------ATTTTCCATT
C G T A C G T A A G T C C G A T A T C G A C G T C T A G A C G T A T C G A C G T A C G T G T C A A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.52
Offset:11
Orientation:forward strand
Alignment:AACWSTGKSTTMTCCA-
-----------ATCCAC
C G T A C G T A A G T C C G A T A T C G A C G T C T A G A C G T A T C G A C G T A C G T G T C A A C G T A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

NR3C2/MA0727.1/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AACWSTGKSTTMTCCA
GGGAACATTGTGTTCCC--
A C G T A C G T A C G T C G T A C G T A A G T C C G A T A T C G A C G T C T A G A C G T A T C G A C G T A C G T G T C A A C G T A G T C A G T C C G T A
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AACWSTGKSTTMTCCA
AGNACAGNCTGTTCTN--
A C G T A C G T C G T A C G T A A G T C C G A T A T C G A C G T C T A G A C G T A T C G A C G T A C G T G T C A A C G T A G T C A G T C C G T A
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T A C G T