p-value: | 1e-9 |
log p-value: | -2.139e+01 |
Information Content per bp: | 1.848 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 1.52% |
Number of Background Sequences with motif | 2.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 50.2 +/- 32.3bp |
Average Position of motif in Background | 22.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.71 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTTACTDGT TGACCTYA----- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 2 |
Score: | 0.71 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACCTTACTDGT GTGACCTT------ |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 3 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGACCTTACTDGT NTGACCTTGA---- |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 4 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGACCTTACTDGT BNTGDCCTTG----- |
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Esrrg/MA0643.1/Jaspar
Match Rank: | 5 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACCTTACTDGT ATGACCTTGA---- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 6 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTTACTDGT TGACCT------- |
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RORA/MA0071.1/Jaspar
Match Rank: | 7 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTTACTDGT TGACCTTGAT--- |
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PB0014.1_Esrra_1/Jaspar
Match Rank: | 8 |
Score: | 0.63 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TGACCTTACTDGT NNNNATGACCTTGANTN- |
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PB0049.1_Nr2f2_1/Jaspar
Match Rank: | 9 |
Score: | 0.62 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGACCTTACTDGT NNNNTGACCTTTNNNN- |
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PB0053.1_Rara_1/Jaspar
Match Rank: | 10 |
Score: | 0.62 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGACCTTACTDGT NNNGTGACCTTTGNNN- |
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