Information for 2-TTGTTGGCTGGCG (Motif 11)

C G A T A C G T C T A G A C G T A C G T A C T G A C T G A G T C G A C T C T A G A C T G A G T C C T A G
Reverse Opposite:
A G T C A C T G G T A C A G T C C T G A T C A G A G T C A G T C G T C A G T C A A G T C C G T A C G T A
p-value:1e-9
log p-value:-2.139e+01
Information Content per bp:1.806
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.2 +/- 23.4bp
Average Position of motif in Background28.6 +/- 5.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTGTTGGCTGGCG
---TTGGCA----
 C G A T A C G T C T A G A C G T A C G T A C T G A C T G A G T C G A C T C T A G A C T G A G T C C T A G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTGTTGGCTGGCG
TGATTGGCTANN-
 C G A T A C G T C T A G A C G T A C G T A C T G A C T G A G T C G A C T C T A G A C T G A G T C C T A G
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTGTTGGCTGGCG
--NTTGGCANN--
 C G A T A C G T C T A G A C G T A C G T A C T G A C T G A G T C G A C T C T A G A C T G A G T C C T A G
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTGGCTGGCG
CCGATTGGCT----
 A C G T C G A T A C G T C T A G A C G T A C G T A C T G A C T G A G T C G A C T C T A G A C T G A G T C C T A G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTGTTGGCTGGCG----
-NGTAGGTTGGCATNNN
 C G A T A C G T C T A G A C G T A C G T A C T G A C T G A G T C G A C T C T A G A C T G A G T C C T A G A C G T A C G T A C G T A C G T
A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

HOXB13/MA0901.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTGTTGGCTGGCG
NTTTTATTGG------
 A C G T A C G T A C G T C G A T A C G T C T A G A C G T A C G T A C T G A C T G A G T C G A C T C T A G A C T G A G T C C T A G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TTGTTGGCTGGCG
NNAATTTTATTGGNTN---
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T C T A G A C G T A C G T A C T G A C T G A G T C G A C T C T A G A C T G A G T C C T A G
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTGTTGGCTGGCG
ATTGTT--------
 A C G T C G A T A C G T C T A G A C G T A C G T A C T G A C T G A G T C G A C T C T A G A C T G A G T C C T A G
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTGTTGGCTGGCG
NTNTTGTTGTTTGTN-
 A C G T A C G T A C G T C G A T A C G T C T A G A C G T A C G T A C T G A C T G A G T C G A C T C T A G A C T G A G T C C T A G
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTGGCTGGCG-
CTGATTGGTCNATTT
 A C G T C G A T A C G T C T A G A C G T A C G T A C T G A C T G A G T C G A C T C T A G A C T G A G T C C T A G A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T