p-value: | 1e-8 |
log p-value: | -1.899e+01 |
Information Content per bp: | 1.749 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 2.42% |
Number of Background Sequences with motif | 26.4 |
Percentage of Background Sequences with motif | 0.05% |
Average Position of motif in Targets | 56.7 +/- 24.0bp |
Average Position of motif in Background | 46.8 +/- 25.6bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.17 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 1 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCTTGCWGTCCGT GGTCTGGCAT----- |
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PB0139.1_Irf5_2/Jaspar
Match Rank: | 2 |
Score: | 0.52 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TCTTGCWGTCCGT NNAATTCTCGNTNAN--- |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 3 |
Score: | 0.50 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCTTGCWGTCCGT NNTCCTGCTGTGNNN |
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NRL/MA0842.1/Jaspar
Match Rank: | 4 |
Score: | 0.50 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TCTTGCWGTCCGT AATTTGCTGAC--- |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 5 |
Score: | 0.49 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCTTGCWGTCCGT TGTCTGDCACCT--- |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 6 |
Score: | 0.48 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCTTGCWGTCCGT -CCTGCTGAGH-- |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 7 |
Score: | 0.48 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCTTGCWGTCCGT TNTCCTGCTGTGNNG |
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PB0138.1_Irf4_2/Jaspar
Match Rank: | 8 |
Score: | 0.47 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TCTTGCWGTCCGT AGTATTCTCGGTTGC--- |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 9 |
Score: | 0.47 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCTTGCWGTCCGT TCNCCTGCTGNGNNN |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 10 |
Score: | 0.47 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TCTTGCWGTCCGT VBSYGTCTGG-------- |
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