Information for 2-GGCAGAAATA (Motif 8)

T C A G A T C G A T G C C G T A A T C G C G T A G T C A T C G A C G A T T G C A
Reverse Opposite:
A C G T C G T A A G C T C A G T A C G T A T G C C G A T A T C G A T G C A G T C
p-value:1e-8
log p-value:-1.919e+01
Information Content per bp:1.725
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif8.47%
Number of Background Sequences with motif870.4
Percentage of Background Sequences with motif1.76%
Average Position of motif in Targets47.0 +/- 26.1bp
Average Position of motif in Background50.4 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGCAGAAATA-
CAATTGCAAAAATAT
 A C G T A C G T A C G T A C G T T C A G A T C G A T G C C G T A A T C G C G T A G T C A T C G A C G A T T G C A A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGCAGAAATA-
-CCAGACRSVB
 T C A G A T C G A T G C C G T A A T C G C G T A G T C A T C G A C G A T T G C A A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGCAGAAATA--
KCCAAAAATAGC
 T C A G A T C G A T G C C G T A A T C G C G T A G T C A T C G A C G A T T G C A A C G T A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGCAGAAATA
ATGCCAGACN--
 A C G T A C G T T C A G A T C G A T G C C G T A A T C G C G T A G T C A T C G A C G A T T G C A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGCAGAAATA--
DCYAAAAATAGM
 T C A G A T C G A T G C C G T A A T C G C G T A G T C A T C G A C G A T T G C A A C G T A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

ETV6/MA0645.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGCAGAAATA
AGCGGAAGTG
 T C A G A T C G A T G C C G T A A T C G C G T A G T C A T C G A C G A T T G C A
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGCAGAAATA---
CGAAGCACACAAAATA
 A C G T A C G T A C G T T C A G A T C G A T G C C G T A A T C G C G T A G T C A T C G A C G A T T G C A A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCAGAAATA---
ATGCTAAAAATAGAA
 A C G T A C G T T C A G A T C G A T G C C G T A A T C G C G T A G T C A T C G A C G A T T G C A A C G T A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGCAGAAATA
-CCAGACAG-
 T C A G A T C G A T G C C G T A A T C G C G T A G T C A T C G A C G A T T G C A
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCAGAAATA--
GCTAAAAATAGC
 T C A G A T C G A T G C C G T A A T C G C G T A G T C A T C G A C G A T T G C A A C G T A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C