Information for 3-AMCYYCTYAGAMRWTR (Motif 4)

C G T A G T C A A G T C A G C T A G C T A G T C A C G T G A T C C G T A A C T G C G T A G T A C C T G A C G T A A C G T C T A G
Reverse Opposite:
A G T C C G T A C G A T A G C T A C T G A C G T A G T C A C G T C T A G C G T A A C T G C T G A C T G A A C T G A C G T A C G T
p-value:1e-10
log p-value:-2.440e+01
Information Content per bp:1.815
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.8 +/- 28.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AMCYYCTYAGAMRWTR
--TTTCTNAGAAAN--
 C G T A G T C A A G T C A G C T A G C T A G T C A C G T G A T C C G T A A C T G C G T A G T A C C T G A C G T A A C G T C T A G
A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AMCYYCTYAGAMRWTR
---TTCTTGGAAAN--
 C G T A G T C A A G T C A G C T A G C T A G T C A C G T G A T C C G T A A C T G C G T A G T A C C T G A C G T A A C G T C T A G
A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AMCYYCTYAGAMRWTR----
-----CTCACACAATGGCGC
 C G T A G T C A A G T C A G C T A G C T A G T C A C G T G A T C C G T A A C T G C G T A G T A C C T G A C G T A A C G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PH0004.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AMCYYCTYAGAMRWTR
CATAACCACTTAACAAC--
 A C G T A C G T A C G T C G T A G T C A A G T C A G C T A G C T A G T C A C G T G A T C C G T A A C T G C G T A G T A C C T G A C G T A A C G T C T A G
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:AMCYYCTYAGAMRWTR
------BCAGACWA--
 C G T A G T C A A G T C A G C T A G C T A G T C A C G T G A T C C G T A A C T G C G T A G T A C C T G A C G T A A C G T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AMCYYCTYAGAMRWTR
--TTCCKNAGAA----
 C G T A G T C A A G T C A G C T A G C T A G T C A C G T G A T C C G T A A C T G C G T A G T A C C T G A C G T A A C G T C T A G
A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:AMCYYCTYAGAMRWTR--
---------GACAATGNN
 C G T A G T C A A G T C A G C T A G C T A G T C A C G T G A T C C G T A A C T G C G T A G T A C C T G A C G T A A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---AMCYYCTYAGAMRWTR
CTTAACCACTTAAGGAT--
 A C G T A C G T A C G T C G T A G T C A A G T C A G C T A G C T A G T C A C G T G A T C C G T A A C T G C G T A G T A C C T G A C G T A A C G T C T A G
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-AMCYYCTYAGAMRWTR
NNNTTTCCTGGAAA---
 A C G T C G T A G T C A A G T C A G C T A G C T A G T C A C G T G A T C C G T A A C T G C G T A G T A C C T G A C G T A A C G T C T A G
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:AMCYYCTYAGAMRWTR
----CCTTTGATGT--
 C G T A G T C A A G T C A G C T A G C T A G T C A C G T G A T C C G T A A C T G C G T A G T A C C T G A C G T A A C G T C T A G
A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T