Information for 2-AMASYCAYAYRATGAG (Motif 3)

C G T A G T A C C G T A T A C G A G C T A G T C C G T A A G C T C G T A A G C T C T A G C G T A A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A A C G T A G T C C T G A A C G T T C A G A C G T A C T G C T G A A T C G A C G T A C T G A C G T
p-value:1e-10
log p-value:-2.440e+01
Information Content per bp:1.854
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.8 +/- 21.6bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AMASYCAYAYRATGAG-----
----AAACATAATGAGGTTGC
 C G T A G T A C C G T A T A C G A G C T A G T C C G T A A G C T C G T A A G C T C T A G C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

POU6F2/MA0793.1/Jaspar

Match Rank:2
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:AMASYCAYAYRATGAG--
--------NTAATGAGCT
 C G T A G T A C C G T A T A C G A G C T A G T C C G T A A G C T C G T A A G C T C T A G C G T A A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AMASYCAYAYRATGAG-----
----GACGATAATGAGCTTGC
 C G T A G T A C C G T A T A C G A G C T A G T C C G T A A G C T C G T A A G C T C T A G C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

PB0177.1_Sox7_2/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AMASYCAYAYRATGAG---
NNCNNNCNCANACAATTAGNAC
 A C G T A C G T A C G T C G T A G T A C C G T A T A C G A G C T A G T C C G T A A G C T C G T A A G C T C T A G C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C

PB0170.1_Sox17_2/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AMASYCAYAYRATGAG
GACCACATTCATACAAT---
 A C G T A C G T A C G T A C G T C G T A G T A C C G T A T A C G A G C T A G T C C G T A A G C T C G T A A G C T C T A G C G T A A C G T A C T G C G T A A C T G
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AMASYCAYAYRATGAG--
---CTCACACAATGGCGC
 C G T A G T A C C G T A T A C G A G C T A G T C C G T A A G C T C G T A A G C T C T A G C G T A A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AMASYCAYAYRATGAG
---GTCACATGAY---
 C G T A G T A C C G T A T A C G A G C T A G T C C G T A A G C T C G T A A G C T C T A G C G T A A C G T A C T G C G T A A C T G
A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AMASYCAYAYRATGAG----
---NNTNNACAATGGGANNN
 C G T A G T A C C G T A T A C G A G C T A G T C C G T A A G C T C G T A A G C T C T A G C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AMASYCAYAYRATGAG
ATTTGCATACAATGG-
 C G T A G T A C C G T A T A C G A G C T A G T C C G T A A G C T C G T A A G C T C T A G C G T A A C G T A C T G C G T A A C T G
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:AMASYCAYAYRATGAG
-------GACAATGNN
 C G T A G T A C C G T A T A C G A G C T A G T C C G T A A G C T C G T A A G C T C T A G C G T A A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G