Information for 4-CAGTAATTGATTT (Motif 9)

A G T C C G T A A C T G A C G T C G T A C T G A C G A T A C G T A C T G C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T G T A C C G T A C G T A A G C T A C G T C G T A A G T C A C G T A C T G
p-value:1e-10
log p-value:-2.418e+01
Information Content per bp:1.948
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.2 +/- 30.3bp
Average Position of motif in Background54.4 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:CAGTAATTGATTT
---TAATTGATTA
 A G T C C G T A A C T G A C G T C G T A C T G A C G A T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

PAX3/MA0780.1/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CAGTAATTGATTT
---TAATCGATTA
 A G T C C G T A A C T G A C G T C G T A C T G A C G A T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T G A T C G A G A C T A G T C T C A G T C G A C A G T A G C T G C T A

PAX7/MA0680.1/Jaspar

Match Rank:3
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CAGTAATTGATTT
---TAATCGATTA
 A G T C C G T A A C T G A C G T C G T A C T G A C G A T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T G A C G T A G A C T A G T C T C A G C T G A A C G T A C G T G C T A

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CAGTAATTGATTT--
CNNAGTAATTAATTNNC
 A C G T A C G T A G T C C G T A A C T G A C G T C G T A C T G A C G A T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
T A G C T C A G T C G A C T G A C A T G G A C T G T C A C G T A C G A T C G A T C T G A G C T A C G A T G C A T C G A T A C G T G A T C

PH0120.1_Nkx6-3/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CAGTAATTGATTT--
CNNANTAATTAATTNNC
 A C G T A C G T A G T C C G T A A C T G A C G T C G T A C T G A C G A T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
T G A C T C G A T G C A T C G A A C T G G A C T T G C A C G T A G A C T G A C T C T G A G C T A C G A T C G A T C G A T A C G T G A T C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:6
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:CAGTAATTGATTT--
-----ATTGATTYND
 A G T C C G T A A C T G A C G T C G T A C T G A C G A T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

PH0006.1_Barhl2/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CAGTAATTGATTT--
NNNTTAATTGGTTTTT
 A C G T A G T C C G T A A C T G A C G T C G T A C T G A C G A T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

PH0008.1_Barx2/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CAGTAATTGATTT
NANAANTAATTANTTA
 A C G T A C G T A C G T A G T C C G T A A C T G A C G T C G T A C T G A C G A T A C G T A C T G C G T A A C G T A C G T A C G T
G A C T C T G A G A C T G T C A T C G A A G T C G A C T G T C A G C T A C A G T C A G T C T G A T G A C A G C T C G A T C G T A

PH0038.1_Hlx/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CAGTAATTGATTT--
CCATAATTAATTACA
 A G T C C G T A A C T G A C G T C G T A C T G A C G A T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T C A G A C T G C T A C G T A G A C T G C A T C T G A C T G A G C A T C G A T C T G A G A T C G T C A

PH0007.1_Barx1/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CAGTAATTGATTT
ATNNACTAATTACTTT
 A C G T A C G T A C G T A G T C C G T A A C T G A C G T C G T A C T G A C G A T A C G T A C T G C G T A A C G T A C G T A C G T
C G T A G C A T C A G T G A T C T C G A T A G C G A C T T G C A G T C A A C G T A C G T C T G A A T G C A G C T C A G T C A G T