Information for 3-GCTTTGTGTRTTTTGA (Motif 6)

C A T G A G T C G A C T A C G T A C G T C T A G A C G T C T A G A C G T C T G A C G A T C G A T A C G T G A C T A C T G C G T A
Reverse Opposite:
A C G T T A G C C G T A C G T A C G T A C G T A A G C T C G T A G A T C G T C A A G T C C G T A C G T A C G T A C T A G G T A C
p-value:1e-11
log p-value:-2.732e+01
Information Content per bp:1.761
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif55.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets58.5 +/- 25.1bp
Average Position of motif in Background58.0 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GCTTTGTGTRTTTTGA
ANTCCTTTGTCTNNNN---
 A C G T A C G T A C G T C A T G A G T C G A C T A C G T A C G T C T A G A C G T C T A G A C G T C T G A C G A T C G A T A C G T G A C T A C T G C G T A
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCTTTGTGTRTTTTGA
-CTTTGT---------
 C A T G A G T C G A C T A C G T A C G T C T A G A C G T C T A G A C G T C T G A C G A T C G A T A C G T G A C T A C T G C G T A
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTGTGTRTTTTGA
NNNTTTGTTTACATTTN
 A C G T C A T G A G T C G A C T A C G T A C G T C T A G A C G T C T A G A C G T C T G A C G A T C G A T A C G T G A C T A C T G C G T A
T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCTTTGTGTRTTTTGA
NNNCCATTGTGTNAN----
 A C G T A C G T A C G T C A T G A G T C G A C T A C G T A C G T C T A G A C G T C T A G A C G T C T G A C G A T C G A T A C G T G A C T A C T G C G T A
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTGTGTRTTTTGA
NNNTTTGTTTACNTTNN
 A C G T C A T G A G T C G A C T A C G T A C G T C T A G A C G T C T A G A C G T C T G A C G A T C G A T A C G T G A C T A C T G C G T A
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTGTGTRTTTTGA
NNNTTTGTTTACNTTNN
 A C G T C A T G A G T C G A C T A C G T A C G T C T A G A C G T C T A G A C G T C T G A C G A T C G A T A C G T G A C T A C T G C G T A
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCTTTGTGTRTTTTGA
CCWTTGTYYB------
 C A T G A G T C G A C T A C G T A C G T C T A G A C G T C T A G A C G T C T G A C G A T C G A T A C G T G A C T A C T G C G T A
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCTTTGTGTRTTTTGA
--TTTGTTTACTTA--
 C A T G A G T C G A C T A C G T A C G T C T A G A C G T C T A G A C G T C T G A C G A T C G A T A C G T G A C T A C T G C G T A
A C G T A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTGTGTRTTTTGA
NNNNTTGTGTGCTTNN-
 A C G T C A T G A G T C G A C T A C G T A C G T C T A G A C G T C T A G A C G T C T G A C G A T C G A T A C G T G A C T A C T G C G T A
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTGTGTRTTTTGA
NNNTTTGTTTACTTTTN
 A C G T C A T G A G T C G A C T A C G T A C G T C T A G A C G T C T A G A C G T C T G A C G A T C G A T A C G T G A C T A C T G C G T A
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T