Information for 2-KGSMWGAGTTCCC (Motif 4)

A C T G A C T G A T G C G T A C C G T A A C T G C G T A A C T G A C G T A C G T A G T C A G T C A G T C
Reverse Opposite:
C T A G A C T G A C T G C G T A C G T A G T A C A C G T A G T C C G A T A C T G A T C G A G T C G T A C
p-value:1e-12
log p-value:-2.764e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.4 +/- 31.8bp
Average Position of motif in Background83.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0058.1_Sfpi1_1/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:KGSMWGAGTTCCC-----
----NNACTTCCTCTTNN
 A C T G A C T G A T G C G T A C C G T A A C T G C G T A A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:forward strand
Alignment:KGSMWGAGTTCCC---
------HTTTCCCASG
 A C T G A C T G A T G C G T A C C G T A A C T G C G T A A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PH0037.1_Hdx/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-KGSMWGAGTTCCC---
TNNNATGATTTCNNCNN
 A C G T A C T G A C T G A T G C G T A C C G T A A C T G C G T A A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:KGSMWGAGTTCCC----
-----CACTTCCYCTTT
 A C T G A C T G A T G C G T A C C G T A A C T G C G T A A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:KGSMWGAGTTCCC-----
--------TTCCCGCCWG
 A C T G A C T G A T G C G T A C C G T A A C T G C G T A A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:KGSMWGAGTTCCC--
--------TTCCTCT
 A C T G A C T G A T G C G T A C C G T A A C T G C G T A A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T

MZF1/MA0056.1/Jaspar

Match Rank:7
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:KGSMWGAGTTCCC--
---------TCCCCA
 A C T G A C T G A T G C G T A C C G T A A C T G C G T A A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:KGSMWGAGTTCCC---
------NYTTCCCGCC
 A C T G A C T G A T G C G T A C C G T A A C T G C G T A A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:KGSMWGAGTTCCC
---GGGAATTTCC
 A C T G A C T G A T G C G T A C C G T A A C T G C G T A A C T G A C G T A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:KGSMWGAGTTCCC
-GGGGGAATCCCC
 A C T G A C T G A T G C G T A C C G T A A C T G C G T A A C T G A C G T A C G T A G T C A G T C A G T C
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C