Information for 1-AAGTAATTGGAAA (Motif 3)

C G T A C G T A A C T G A C G T C G T A C G T A C A G T C G A T C T A G A C T G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C A G T C C G T A G C T A A C G T A C G T C G T A A G T C A C G T A C G T
p-value:1e-12
log p-value:-2.764e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.6 +/- 24.8bp
Average Position of motif in Background35.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:AAGTAATTGGAAA--
-----AATGGAAAAT
 C G T A C G T A A C T G A C G T C G T A C G T A C A G T C G A T C T A G A C T G C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:AAGTAATTGGAAA--
-----AATGGAAAAT
 C G T A C G T A A C T G A C G T C G T A C G T A C A G T C G A T C T A G A C T G C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:3
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:AAGTAATTGGAAA--
-----NNTGGAAANN
 C G T A C G T A A C T G A C G T C G T A C G T A C A G T C G A T C T A G A C T G C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:AAGTAATTGGAAA--
-----NATGGAAAAN
 C G T A C G T A A C T G A C G T C G T A C G T A C A G T C G A T C T A G A C T G C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

MSX2/MA0708.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AAGTAATTGGAAA
--NTAATTGG---
 C G T A C G T A A C T G A C G T C G T A C G T A C A G T C G A T C T A G A C T G C G T A C G T A C G T A
A C G T A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:AAGTAATTGGAAA-
-------TGGAAAA
 C G T A C G T A A C T G A C G T C G T A C G T A C A G T C G A T C T A G A C T G C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

MSX1/MA0666.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAGTAATTGGAAA
--NTAATTGG---
 C G T A C G T A A C T G A C G T C G T A C G T A C A G T C G A T C T A G A C T G C G T A C G T A C G T A
A C G T A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T

DLX6/MA0882.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAGTAATTGGAAA
--NTAATTGN---
 C G T A C G T A A C T G A C G T C G T A C G T A C A G T C G A T C T A G A C T G C G T A C G T A C G T A
A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G A C G T A C G T A C G T

Dlx4/MA0881.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAGTAATTGGAAA
--NTAATTGN---
 C G T A C G T A A C T G A C G T C G T A C G T A C A G T C G A T C T A G A C T G C G T A C G T A C G T A
A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AAGTAATTGGAAA-
--GWAAYHTGAKMC
 C G T A C G T A A C T G A C G T C G T A C G T A C A G T C G A T C T A G A C T G C G T A C G T A C G T A A C G T
A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C