Information for 7-CACACTTATT (Motif 19)

T G A C C G T A A G T C G T C A A G T C G A C T A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A T G C A A C G T C G T A C T G A A C T G C A G T C T A G C G A T A C T G
p-value:1e-7
log p-value:-1.700e+01
Information Content per bp:1.771
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif3.49%
Number of Background Sequences with motif345.0
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets32.1 +/- 22.6bp
Average Position of motif in Background52.9 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX3-2/MA0122.2/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CACACTTATT
ACCACTTAA-
 T G A C C G T A A G T C G T C A A G T C G A C T A C G T C G T A A C G T A C G T
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CACACTTATT
ACCACTTAA-
 T G A C C G T A A G T C G T C A A G T C G A C T A C G T C G T A A C G T A C G T
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CACACTTATT
-GCACTTAA-
 T G A C C G T A A G T C G T C A A G T C G A C T A C G T C G T A A C G T A C G T
A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T

Nkx2-5/MA0063.1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CACACTTATT
--CAATTAA-
 T G A C C G T A A G T C G T C A A G T C G A C T A C G T C G T A A C G T A C G T
A C G T A C G T G T A C C G T A G T C A A C G T A C G T C T G A G C T A A C G T

HLTF/MA0109.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CACACTTATT-
-AACCTTATAT
 T G A C C G T A A G T C G T C A A G T C G A C T A C G T C G T A A C G T A C G T A C G T
A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CACACTTATT
-BCMATTAG-
 T G A C C G T A A G T C G T C A A G T C G A C T A C G T C G T A A C G T A C G T
A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CACACTTATT
---AATTATT
 T G A C C G T A A G T C G T C A A G T C G A C T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T

PB0106.1_Arid5a_2/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CACACTTATT-----
TNNTTTCGTATTNNANN
 A C G T A C G T T G A C C G T A A G T C G T C A A G T C G A C T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

TBX4/MA0806.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CACACTTATT
TCACACCT---
 A C G T T G A C C G T A A G T C G T C A A G T C G A C T A C G T C G T A A C G T A C G T
G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CACACTTATT
TCACACCT---
 A C G T T G A C C G T A A G T C G T C A A G T C G A C T A C G T C G T A A C G T A C G T
G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T