Information for 5-AAYCCWWAASTCT (Motif 7)

C G T A C G T A A G T C A G T C A T G C G C T A C G T A C G T A C G T A A T C G A C G T A T G C A C G T
Reverse Opposite:
C G T A A T C G C G T A A T G C A C G T A C G T C G A T C G A T A T C G A C T G C T A G A C G T A C G T
p-value:1e-12
log p-value:-2.965e+01
Information Content per bp:1.871
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.7 +/- 24.8bp
Average Position of motif in Background48.1 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ELF1/MA0473.2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAYCCWWAASTCT
AACCCGGAAGTG-
 C G T A C G T A A G T C A G T C A T G C G C T A C G T A C G T A C G T A A T C G A C G T A T G C A C G T
C G T A G C T A G T A C T A G C G T A C A C T G A C T G C T G A G C T A C T A G G A C T T C A G A C G T

IRF8/MA0652.1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAYCCWWAASTCT
TCGAAACCGAAACT--
 A C G T A C G T A C G T C G T A C G T A A G T C A G T C A T G C G C T A C G T A C G T A C G T A A T C G A C G T A T G C A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T A C G T A C G T

ELF4/MA0641.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAYCCWWAASTCT
AACCCGGAAGTG-
 C G T A C G T A A G T C A G T C A T G C G C T A C G T A C G T A C G T A A T C G A C G T A T G C A C G T
C G T A G C T A G T A C T A G C T G A C C T A G A C T G C G T A G T C A T C A G A G C T C T A G A C G T

EHF/MA0598.2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAYCCWWAASTCT
AACCCGGAAGTA-
 C G T A C G T A A G T C A G T C A T G C G C T A C G T A C G T A C G T A A T C G A C G T A T G C A C G T
G C T A G C T A T A G C T A G C T G A C T C A G A C T G G T C A T G C A T C A G G A C T C T G A A C G T

ELF3/MA0640.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAYCCWWAASTCT
AACCCGGAAGTAA
 C G T A C G T A A G T C A G T C A T G C G C T A C G T A C G T A C G T A A T C G A C G T A T G C A C G T
G C T A G C T A T A G C T A G C T G A C C T A G A C T G T C G A G C T A C T A G G A C T C T G A C T G A

IRF9/MA0653.1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AAYCCWWAASTCT
AACGAAACCGAAACT--
 A C G T A C G T A C G T A C G T C G T A C G T A A G T C A G T C A T G C G C T A C G T A C G T A C G T A A T C G A C G T A T G C A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AAYCCWWAASTCT-
-GGCCATAAATCAC
 C G T A C G T A A G T C A G T C A T G C G C T A C G T A C G T A C G T A A T C G A C G T A T G C A C G T A C G T
A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AAYCCWWAASTCT
-GGCCATAAATCA
 C G T A C G T A A G T C A G T C A T G C G C T A C G T A C G T A C G T A A T C G A C G T A T G C A C G T
A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AAYCCWWAASTCT
TCCAATCCACA-----
 A C G T A C G T A C G T C G T A C G T A A G T C A G T C A T G C G C T A C G T A C G T A C G T A A T C G A C G T A T G C A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AAYCCWWAASTCT
TAATCCCN------
 A C G T C G T A C G T A A G T C A G T C A T G C G C T A C G T A C G T A C G T A A T C G A C G T A T G C A C G T
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T