Information for 14-CACATGCATGTGT (Motif 18)

A G T C C T G A A G T C C T G A A G C T C T A G T A G C T G C A A C G T A C T G A G C T T A C G C G A T
Reverse Opposite:
G C T A A G T C C T G A A G T C C G T A A C G T A C T G G A T C T C G A A G C T A C T G A G C T T A C G
p-value:1e-7
log p-value:-1.780e+01
Information Content per bp:1.769
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif26.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets39.4 +/- 28.1bp
Average Position of motif in Background49.9 +/- 40.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CACATGCATGTGT--
NTTNTATGAATGTGNNC
 A C G T A C G T A G T C C T G A A G T C C T G A A G C T C T A G T A G C T G C A A C G T A C T G A G C T T A C G C G A T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

T/MA0009.2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CACATGCATGTGT--
TCACACCTAGGTGTGA
 A C G T A G T C C T G A A G T C C T G A A G C T C T A G T A G C T G C A A C G T A C T G A G C T T A C G C G A T A C G T A C G T
G A C T T G A C C T G A A G T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T C T A G G A C T A C T G C T G A

TBX19/MA0804.1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CACATGCATGTGT----
TTTCACACCTAGGTGTGAAN
 A C G T A C G T A C G T A G T C C T G A A G T C C T G A A G C T C T A G T A G C T G C A A C G T A C T G A G C T T A C G C G A T A C G T A C G T A C G T A C G T
C G A T C G A T G A C T T G A C C T G A G A T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T T C A G G A C T A C T G C T G A G T C A G C T A

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CACATGCATGTGT
NNTNTCATGAATGT--
 A C G T A C G T A C G T A G T C C T G A A G T C C T G A A G C T C T A G T A G C T G C A A C G T A C T G A G C T T A C G C G A T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CACATGCATGTGT--
GTCATGCHTGRCTGS
 A G T C C T G A A G T C C T G A A G C T C T A G T A G C T G C A A C G T A C T G A G C T T A C G C G A T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CACATGCATGTGT
NNACTTGCCTT---
 A C G T A G T C C T G A A G T C C T G A A G C T C T A G T A G C T G C A A C G T A C T G A G C T T A C G C G A T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CACATGCATGTGT---
-AYATGYATATGCATR
 A G T C C T G A A G T C C T G A A G C T C T A G T A G C T G C A A C G T A C T G A G C T T A C G C G A T A C G T A C G T A C G T
A C G T C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

Myc/MA0147.2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CACATGCATGTGT
AAGCACATGG------
 A C G T A C G T A C G T A G T C C T G A A G T C C T G A A G C T C T A G T A G C T G C A A C G T A C T G A G C T T A C G C G A T
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CACATGCATGTGT-
----GGCACGTGTC
 A G T C C T G A A G T C C T G A A G C T C T A G T A G C T G C A A C G T A C T G A G C T T A C G C G A T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C

Mlxip/MA0622.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CACATGCATGTGT
-----GCACGTGT
 A G T C C T G A A G T C C T G A A G C T C T A G T A G C T G C A A C G T A C T G A G C T T A C G C G A T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T