Information for 3-TACTACCCATCTA (Motif 9)

A C G T C G T A A G T C A C G T C G T A G T A C A G T C A G T C C G T A A C G T A G T C C G A T G C T A
Reverse Opposite:
C A G T C G T A A C T G C G T A A C G T A C T G A C T G A C T G A C G T C G T A A C T G A C G T C G T A
p-value:1e-5
log p-value:-1.302e+01
Information Content per bp:1.939
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.8 +/- 24.5bp
Average Position of motif in Background35.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TACTACCCATCTA------
--TCACCCATCAATAAACA
 A C G T C G T A A G T C A C G T C G T A G T A C A G T C A G T C C G T A A C G T A G T C C G A T G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PB0115.1_Ehf_2/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TACTACCCATCTA
TAGTATTTCCGATCTT
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A G T A C A G T C A G T C C G T A A C G T A G T C C G A T G C T A
C G A T C G T A T C A G C A G T C T G A A C G T C G A T C G A T G A T C G A T C A C T G G C T A G C A T T A G C C G A T G C A T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TACTACCCATCTA
--TTCCCCCTAC-
 A C G T C G T A A G T C A C G T C G T A G T A C A G T C A G T C C G T A A C G T A G T C C G A T G C T A
A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TACTACCCATCTA--
-----ACCATCTGTT
 A C G T C G T A A G T C A C G T C G T A G T A C A G T C A G T C C G T A A C G T A G T C C G A T G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TACTACCCATCTA--
-----GCCATCTGTT
 A C G T C G T A A G T C A C G T C G T A G T A C A G T C A G T C C G T A A C G T A G T C C G A T G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TACTACCCATCTA-
----GGCCATTAAC
 A C G T C G T A A G T C A C G T C G T A G T A C A G T C A G T C C G T A A C G T A G T C C G A T G C T A A C G T
A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TACTACCCATCTA
GGACCACCCACG--
 A C G T A C G T C G T A A G T C A C G T C G T A G T A C A G T C A G T C C G T A A C G T A G T C C G A T G C T A
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TACTACCCATCTA-
NNNTCCATCCCATAANN
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A G T A C A G T C A G T C C G T A A C G T A G T C C G A T G C T A A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

PB0167.1_Sox13_2/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TACTACCCATCTA----
ANNTNCCCACCCANNAC
 A C G T C G T A A G T C A C G T C G T A G T A C A G T C A G T C C G T A A C G T A G T C C G A T G C T A A C G T A C G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

SPIC/MA0687.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TACTACCCATCTA-
TACTTCCTCTTTTN
 A C G T C G T A A G T C A C G T C G T A G T A C A G T C A G T C C G T A A C G T A G T C C G A T G C T A A C G T
C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T