Information for 5-CTMTCYTCTCTGACTG (Motif 6)

A G T C A C G T T G C A A C G T T G A C A G C T A G C T A T G C C G A T A T G C A C G T A C T G G C T A G T A C A C G T A T C G
Reverse Opposite:
A T G C T C G A C A T G C A G T G T A C C G T A A T C G C G T A A T C G C T G A C T G A A C T G G T C A A C G T C G T A A C T G
p-value:1e-7
log p-value:-1.718e+01
Information Content per bp:1.704
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif4.95%
Number of Background Sequences with motif41.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets61.2 +/- 15.8bp
Average Position of motif in Background43.7 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTMTCYTCTCTGACTG--
GCCTCCTCCMTCWGACTGKS
 A C G T A C G T A G T C A C G T T G C A A C G T T G A C A G C T A G C T A T G C C G A T A T G C A C G T A C T G G C T A G T A C A C G T A T C G A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

Mecom/MA0029.1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTMTCYTCTCTGACTG
TNTTATCTTATCTT----
 A C G T A C G T A G T C A C G T T G C A A C G T T G A C A G C T A G C T A T G C C G A T A T G C A C G T A C T G G C T A G T A C A C G T A T C G
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T A C G T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CTMTCYTCTCTGACTG
ACTTTCGTTTCT-----
 A C G T A G T C A C G T T G C A A C G T T G A C A G C T A G C T A T G C C G A T A T G C A C G T A C T G G C T A G T A C A C G T A T C G
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:4
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CTMTCYTCTCTGACTG
CCTTTGATCTTT-----
 A C G T A G T C A C G T T G C A A C G T T G A C A G C T A G C T A T G C C G A T A T G C A C G T A C T G G C T A G T A C A C G T A T C G
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:5
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:CTMTCYTCTCTGACTG
---TCTTATCT-----
 A G T C A C G T T G C A A C G T T G A C A G C T A G C T A T G C C G A T A T G C A C G T A C T G G C T A G T A C A C G T A T C G
A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:6
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----CTMTCYTCTCTGACTG
AACCCTTTGATCTTT-----
 A C G T A C G T A C G T A C G T A G T C A C G T T G C A A C G T T G A C A G C T A G C T A T G C C G A T A T G C A C G T A C T G G C T A G T A C A C G T A T C G
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:7
Score:0.47
Offset:3
Orientation:forward strand
Alignment:CTMTCYTCTCTGACTG
---TCTTATCTCCC--
 A G T C A C G T T G C A A C G T T G A C A G C T A G C T A T G C C G A T A T G C A C G T A C T G G C T A G T A C A C G T A T C G
A C G T A C G T A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:CTMTCYTCTCTGACTG--
-NNTNNTGTCTGGNNTNG
 A G T C A C G T T G C A A C G T T G A C A G C T A G C T A T G C C G A T A T G C A C G T A C T G G C T A G T A C A C G T A T C G A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.46
Offset:-2
Orientation:reverse strand
Alignment:--CTMTCYTCTCTGACTG
GYCTGGYYTNTGTCA---
 A C G T A C G T A G T C A C G T T G C A A C G T T G A C A G C T A G C T A T G C C G A T A T G C A C G T A C T G G C T A G T A C A C G T A T C G
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.46
Offset:-2
Orientation:forward strand
Alignment:--CTMTCYTCTCTGACTG
GTCATGCHTGRCTGS---
 A C G T A C G T A G T C A C G T T G C A A C G T T G A C A G C T A G C T A T G C C G A T A T G C A C G T A C T G G C T A G T A C A C G T A T C G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T