Information for 4-AMATWSACYAWTAYAC (Motif 5)

C G T A G T C A C G T A C G A T G C T A T A C G C G T A A G T C A G C T C G T A C G T A C G A T C G T A A G C T C G T A A G T C
Reverse Opposite:
A C T G A C G T T C G A A C G T C G T A C G A T A C G T C T G A C T A G A C G T A T C G C G A T C G T A A C G T A C G T A C G T
p-value:1e-7
log p-value:-1.822e+01
Information Content per bp:1.834
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif2.97%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 26.2bp
Average Position of motif in Background44.1 +/- 6.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:AMATWSACYAWTAYAC---
-------SSAATCCACANN
 C G T A G T C A C G T A C G A T G C T A T A C G C G T A A G T C A G C T C G T A C G T A C G A T C G T A A G C T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

PB0096.1_Zfp187_1/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AMATWSACYAWTAYAC
TTATGTACTAATAA--
 C G T A G T C A C G T A C G A T G C T A T A C G C G T A A G T C A G C T C G T A C G T A C G A T C G T A A G C T C G T A A G T C
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:3
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AMATWSACYAWTAYAC
----AAACMATTAN--
 C G T A G T C A C G T A C G A T G C T A T A C G C G T A A G T C A G C T C G T A C G T A C G A T C G T A A G C T C G T A A G T C
A C G T A C G T A C G T A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.51
Offset:7
Orientation:forward strand
Alignment:AMATWSACYAWTAYAC-
-------CCAATAAAAA
 C G T A G T C A C G T A C G A T G C T A T A C G C G T A A G T C A G C T C G T A C G T A C G A T C G T A A G C T C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

PH0040.1_Hmbox1/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AMATWSACYAWTAYAC
GANGTTAACTAGTTTNN
 A C G T C G T A G T C A C G T A C G A T G C T A T A C G C G T A A G T C A G C T C G T A C G T A C G A T C G T A A G C T C G T A A G T C
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---AMATWSACYAWTAYAC-
AGTAAACAAAAAAGAACANN
 A C G T A C G T A C G T C G T A G T C A C G T A C G A T G C T A T A C G C G T A A G T C A G C T C G T A C G T A C G A T C G T A A G C T C G T A A G T C A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:forward strand
Alignment:AMATWSACYAWTAYAC-
------TCCAATCCACA
 C G T A G T C A C G T A C G A T G C T A T A C G C G T A A G T C A G C T C G T A C G T A C G A T C G T A A G C T C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

Lhx3/MA0135.1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AMATWSACYAWTAYAC
AAATTAATTAATC---
 C G T A G T C A C G T A C G A T G C T A T A C G C G T A A G T C A G C T C G T A C G T A C G A T C G T A A G C T C G T A A G T C
C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C A C G T A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:9
Score:0.49
Offset:6
Orientation:forward strand
Alignment:AMATWSACYAWTAYAC
------GCAATTAG--
 C G T A G T C A C G T A C G A T G C T A T A C G C G T A A G T C A G C T C G T A C G T A C G A T C G T A A G C T C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:AMATWSACYAWTAYAC
-NNNTAACAATTATAN
 C G T A G T C A C G T A C G A T G C T A T A C G C G T A A G T C A G C T C G T A C G T A C G A T C G T A A G C T C G T A A G T C
A C G T A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G