Information for 1-TTTCATTAGTTGK (Motif 2)

A C G T A C G T C G A T A G T C T C G A A C G T A G C T C T G A A C T G A C G T C G A T C T A G A C T G
Reverse Opposite:
G T A C A G T C C G T A G T C A T G A C A G C T C T G A C G T A A C G T C T A G C G T A G T C A G T C A
p-value:1e-9
log p-value:-2.262e+01
Information Content per bp:1.716
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif8.91%
Number of Background Sequences with motif171.4
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets57.2 +/- 24.0bp
Average Position of motif in Background49.4 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0057.1_Hoxb13/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTTCATTAGTTGK
NNAATTTTATTGGNTN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C T C G A A C G T A G C T C T G A A C T G A C G T C G A T C T A G A C T G
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTTCATTAGTTGK
NNANTTTTATTGGNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C T C G A A C G T A G C T C T G A A C T G A C G T C G A T C T A G A C T G
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T

PH0108.1_Msx3/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTTCATTAGTTGK-
NNNTTAATTGGTTTTN
 A C G T A C G T A C G T A C G T C G A T A G T C T C G A A C G T A G C T C T G A A C T G A C G T C G A T C T A G A C T G A C G T
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTCATTAGTTGK
TTTTTATTGG----
 A C G T A C G T A C G T C G A T A G T C T C G A A C G T A G C T C T G A A C T G A C G T C G A T C T A G A C T G
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTCATTAGTTGK
NTTTTATTGG----
 A C G T A C G T A C G T C G A T A G T C T C G A A C G T A G C T C T G A A C T G A C G T C G A T C T A G A C T G
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTCATTAGTTGK
NTTTTATTGG----
 A C G T A C G T A C G T C G A T A G T C T C G A A C G T A G C T C T G A A C T G A C G T C G A T C T A G A C T G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTCATTAGTTGK
TTTTATTRGN---
 A C G T A C G T C G A T A G T C T C G A A C G T A G C T C T G A A C T G A C G T C G A T C T A G A C T G
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTTCATTAGTTGK
TTTTATKRGG---
 A C G T A C G T C G A T A G T C T C G A A C G T A G C T C T G A A C T G A C G T C G A T C T A G A C T G
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTCATTAGTTGK-
NNNTTAATTGGTTTTT
 A C G T A C G T A C G T A C G T C G A T A G T C T C G A A C G T A G C T C T G A A C T G A C G T C G A T C T A G A C T G A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

PH0005.1_Barhl1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTCATTAGTTGK-
GNNTTAATTGGTTGTT
 A C G T A C G T A C G T A C G T C G A T A G T C T C G A A C G T A G C T C T G A A C T G A C G T C G A T C T A G A C T G A C G T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T