Information for 1-GTGGCCTGTKCTGTCT (Motif 1)

A T C G A C G T A T C G A T C G G A T C G A T C C G A T A T C G A C G T A C G T A G T C A C G T C A T G A G C T G T A C A C G T
Reverse Opposite:
G T C A A C T G C T G A G T A C C G T A C T A G G T C A T C G A A T G C C G T A C A T G C A T G A T G C A T G C G T C A A T G C
p-value:1e-12
log p-value:-2.879e+01
Information Content per bp:1.696
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif5.94%
Number of Background Sequences with motif12.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets56.8 +/- 29.8bp
Average Position of motif in Background35.4 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GTGGCCTGTKCTGTCT-------
------NNTNNTGTCTGGNNTNG
 A T C G A C G T A T C G A T C G G A T C G A T C C G A T A T C G A C G T A C G T A G T C A C G T C A T G A G C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.53
Offset:9
Orientation:forward strand
Alignment:GTGGCCTGTKCTGTCT
---------GCTGTG-
 A T C G A C G T A T C G A T C G G A T C G A T C C G A T A T C G A C G T A C G T A G T C A C G T C A T G A G C T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.53
Offset:10
Orientation:forward strand
Alignment:GTGGCCTGTKCTGTCT--
----------CTGTCTGG
 A T C G A C G T A T C G A T C G G A T C G A T C C G A T A T C G A C G T A C G T A G T C A C G T C A T G A G C T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GTGGCCTGTKCTGTCT--
---GYCTGGYYTNTGTCA
 A T C G A C G T A T C G A T C G G A T C G A T C C G A T A T C G A C G T A C G T A G T C A C G T C A T G A G C T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:5
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----GTGGCCTGTKCTGTCT
NNNGGGHAGCAHRTGCTRCC-
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T A T C G A T C G G A T C G A T C C G A T A T C G A C G T A C G T A G T C A C G T C A T G A G C T G T A C A C G T
A T G C A G T C G C A T C T A G A C T G C T A G G A C T C G T A C T A G A G T C T G C A G C A T C T G A A C G T T C A G A G T C A C G T C T A G A G T C A G T C A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.48
Offset:8
Orientation:forward strand
Alignment:GTGGCCTGTKCTGTCT--
--------VBSYGTCTGG
 A T C G A C G T A T C G A T C G G A T C G A T C C G A T A T C G A C G T A C G T A G T C A C G T C A T G A G C T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.48
Offset:9
Orientation:reverse strand
Alignment:GTGGCCTGTKCTGTCT-
---------GCTGTCAA
 A T C G A C G T A T C G A T C G G A T C G A T C C G A T A T C G A C G T A C G T A G T C A C G T C A T G A G C T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GTGGCCTGTKCTGTCT
GTGGCGTGACNG----
 A T C G A C G T A T C G A T C G G A T C G A T C C G A T A T C G A C G T A C G T A G T C A C G T C A T G A G C T G T A C A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T A C G T A C G T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCCTGTKCTGTCT---
NNTGTTCTTTTTTGTTTACT
 A C G T A T C G A C G T A T C G A T C G G A T C G A T C C G A T A T C G A C G T A C G T A G T C A C G T C A T G A G C T G T A C A C G T A C G T A C G T A C G T
G C A T G C T A C G A T A T C G G C A T C G A T G A T C G A C T G C A T A G C T A G C T A G C T G C A T T C A G A C G T A C G T A C G T C T G A G A T C G C A T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GTGGCCTGTKCTGTCT
GTGGAT----------
 A T C G A C G T A T C G A T C G G A T C G A T C C G A T A T C G A C G T A C G T A G T C A C G T C A T G A G C T G T A C A C G T
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T