Information for 12-GSYTGGWTGGWGA (Motif 7)

A C T G A T G C A G C T A C G T A C T G C T A G C G T A A C G T A C T G A C T G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C G C A T G T A C A G T C C G T A C G A T A G T C A G T C C G T A C T G A A T C G A G T C
p-value:1e-11
log p-value:-2.621e+01
Information Content per bp:1.869
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.5 +/- 24.2bp
Average Position of motif in Background48.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GSYTGGWTGGWGA
GTCATGCHTGRCTGS---
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A C T G C T A G C G T A A C G T A C T G A C T G C G T A A C T G C G T A
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GSYTGGWTGGWGA---
GTATTGGGTGGGTAATT
 A C G T A C T G A T G C A G C T A C G T A C T G C T A G C G T A A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

RREB1/MA0073.1/Jaspar

Match Rank:3
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------GSYTGGWTGGWGA
NGGGGGGGGGTGGTTTGGGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A C T G C T A G C G T A A C G T A C T G A C T G C G T A A C T G C G T A
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GSYTGGWTGGWGA
NGTCACGCTTGGCTGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A C T G C T A G C G T A A C G T A C T G A C T G C G T A A C T G C G T A
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GSYTGGWTGGWGA
-------TGGGGA
 A C T G A T G C A G C T A C G T A C T G C T A G C G T A A C G T A C T G A C T G C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GSYTGGWTGGWGA
-CGTGGGTGGTCC
 A C T G A T G C A G C T A C G T A C T G C T A G C G T A A C G T A C T G A C T G C G T A A C T G C G T A
A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

PB0107.1_Ascl2_2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GSYTGGWTGGWGA---
NATNGGGNGGGGANAN
 A C T G A T G C A G C T A C G T A C T G C T A G C G T A A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C G T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GSYTGGWTGGWGA
TGATTGGCTANN--
 A C G T A C T G A T G C A G C T A C G T A C T G C T A G C G T A A C G T A C T G A C T G C G T A A C T G C G T A
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GSYTGGWTGGWGA
--TTGATTGN---
 A C T G A T G C A G C T A C G T A C T G C T A G C G T A A C G T A C T G A C T G C G T A A C T G C G T A
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GSYTGGWTGGWGA-
TATTATGGGATGGATAA
 A C G T A C G T A C G T A C T G A T G C A G C T A C G T A C T G C T A G C G T A A C G T A C T G A C T G C G T A A C T G C G T A A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A