p-value: | 1e-17 |
log p-value: | -3.988e+01 |
Information Content per bp: | 1.826 |
Number of Target Sequences with motif | 32.0 |
Percentage of Target Sequences with motif | 3.64% |
Number of Background Sequences with motif | 229.3 |
Percentage of Background Sequences with motif | 0.48% |
Average Position of motif in Targets | 46.8 +/- 28.6bp |
Average Position of motif in Background | 50.8 +/- 37.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0171.1_Nkx2-1/Jaspar
Match Rank: | 1 |
Score: | 0.73 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TCTAGTGGCT-- AANTTCAAGTGGCTTN |
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PH0113.1_Nkx2-4/Jaspar
Match Rank: | 2 |
Score: | 0.70 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TCTAGTGGCT-- AATTTCAAGTGGCTTN |
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PH0114.1_Nkx2-5/Jaspar
Match Rank: | 3 |
Score: | 0.69 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TCTAGTGGCT-- AAATTCAAGTGGNTTN |
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PH0111.1_Nkx2-2/Jaspar
Match Rank: | 4 |
Score: | 0.69 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TCTAGTGGCT-- NANTTTCAAGTGGTTAN |
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PH0115.1_Nkx2-6/Jaspar
Match Rank: | 5 |
Score: | 0.66 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TCTAGTGGCT-- AATNTTAAGTGGNTNN |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TCTAGTGGCT- ------NGCTN |
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Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TCTAGTGGCT BTBRAGTGSN- |
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NKX2-8/MA0673.1/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TCTAGTGGCT NTCAAGTGG-- |
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NKX2-3/MA0672.1/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TCTAGTGGCT NTCAAGTGGN- |
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CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -9 |
Orientation: | forward strand |
Alignment: | ---------TCTAGTGGCT- ANAGTGCCACCTGGTGGCCA |
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