Information for 10-AATTAATTCA (Motif 15)

G T C A C G T A C G A T A C G T C G T A C G T A C A G T A C G T G A T C G C T A
Reverse Opposite:
C G A T C T A G T G C A G T C A G C A T G C A T T G C A G C T A G C A T A C G T
p-value:1e-6
log p-value:-1.579e+01
Information Content per bp:1.515
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif2.95%
Number of Background Sequences with motif415.1
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets43.6 +/- 27.7bp
Average Position of motif in Background50.1 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0146.1_Pou3f1/Jaspar

Match Rank:1
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----AATTAATTCA---
AATTAATTAATTAATTC
 A C G T A C G T A C G T A C G T G T C A C G T A C G A T A C G T C G T A C G T A C A G T A C G T G A T C G C T A A C G T A C G T A C G T
C T G A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T C G A T G T A C

PH0149.1_Pou3f4/Jaspar

Match Rank:2
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----AATTAATTCA--
GANTTAATTAATTAANN
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G A T A C G T C G T A C G T A C A G T A C G T G A T C G C T A A C G T A C G T
C T A G G C T A G T C A G A C T C G A T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A C G T A A C G T G A C T

PH0142.1_Pou1f1/Jaspar

Match Rank:3
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----AATTAATTCA--
GANTTAATTAATTANNN
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G A T A C G T C G T A C G T A C A G T A C G T G A T C G C T A A C G T A C G T
T A C G G C T A G A T C G C A T C G A T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G T C A G C T A A G C T G A T C

Lhx3/MA0135.1/Jaspar

Match Rank:4
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----AATTAATTCA
GATTAATTAATTT-
 A C G T A C G T A C G T A C G T G T C A C G T A C G A T A C G T C G T A C G T A C A G T A C G T G A T C G C T A
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T A C G T

PH0136.1_Phox2b/Jaspar

Match Rank:5
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---AATTAATTCA----
CGGAATTAATTAATAGG
 A C G T A C G T A C G T G T C A C G T A C G A T A C G T C G T A C G T A C A G T A C G T G A T C G C T A A C G T A C G T A C G T A C G T
T A G C T C A G A C T G G C T A T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A G C T C T G A A T C G A T C G

PH0093.1_Lhx3/Jaspar

Match Rank:6
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--AATTAATTCA-----
GAAATTAATTAAATAAT
 A C G T A C G T G T C A C G T A C G A T A C G T C G T A C G T A C A G T A C G T G A T C G C T A A C G T A C G T A C G T A C G T A C G T
T A C G C G A T G T C A T C G A G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A C G T A C G A T G T C A G T C A A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:7
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--AATTAATTCA-----
CGAATTAATTAAATACT
 A C G T A C G T G T C A C G T A C G A T A C G T C G T A C G T A C A G T A C G T G A T C G C T A A C G T A C G T A C G T A C G T A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

PH0019.1_Dbx2/Jaspar

Match Rank:8
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---AATTAATTCA---
TTTAATTAATTAATTC
 A C G T A C G T A C G T G T C A C G T A C G A T A C G T C G T A C G T A C A G T A C G T G A T C G C T A A C G T A C G T A C G T
A C G T C A G T G A C T G T C A C G T A G C A T G A C T C G T A C G T A C G A T C A G T C T G A C G T A A C G T G C A T G T A C

PH0147.1_Pou3f2/Jaspar

Match Rank:9
Score:0.75
Offset:-6
Orientation:reverse strand
Alignment:------AATTAATTCA-
NNNACTAATTAATTANC
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G A T A C G T C G T A C G T A C A G T A C G T G A T C G C T A A C G T
G A T C C T G A G T C A T G C A G A T C C A G T G T C A C G T A C G A T C A G T C T G A C T G A C A G T G C A T G C T A G C A T A T G C

PH0173.1_Uncx/Jaspar

Match Rank:10
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---AATTAATTCA----
CATAATTAATTAACGCG
 A C G T A C G T A C G T G T C A C G T A C G A T A C G T C G T A C G T A C A G T A C G T G A T C G C T A A C G T A C G T A C G T A C G T
T G A C C T G A G C A T C T G A T G C A A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A G T C T A C G T A G C A C T G