p-value: | 1e-7 |
log p-value: | -1.640e+01 |
Information Content per bp: | 1.928 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.45% |
Number of Background Sequences with motif | 2.1 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 35.6 +/- 20.8bp |
Average Position of motif in Background | 42.0 +/- 18.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.25 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox2/MA0143.3/Jaspar
Match Rank: | 1 |
Score: | 0.70 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CTGCCTCCTTTGT- ------CCTTTGTT |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 2 |
Score: | 0.68 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CTGCCTCCTTTGT- ------CCWTTGTY |
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Sox3/MA0514.1/Jaspar
Match Rank: | 3 |
Score: | 0.67 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CTGCCTCCTTTGT--- ------CCTTTGTTTT |
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Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer
Match Rank: | 4 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTGCCTCCTTTGT -AGGVNCCTTTGT |
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PB0166.1_Sox12_2/Jaspar
Match Rank: | 5 |
Score: | 0.65 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CTGCCTCCTTTGT------ ---ANTCCTTTGTCTNNNN |
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Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
Match Rank: | 6 |
Score: | 0.65 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CTGCCTCCTTTGT--- ------CCWTTGTYYB |
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PB0061.1_Sox11_1/Jaspar
Match Rank: | 7 |
Score: | 0.65 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CTGCCTCCTTTGT------ --NNNTCCTTTGTTCTNNN |
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Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer
Match Rank: | 8 |
Score: | 0.64 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CTGCCTCCTTTGT--- ------YCTTTGTTCC |
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PB0071.1_Sox4_1/Jaspar
Match Rank: | 9 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CTGCCTCCTTTGT------ --TNNTCCTTTGTTCTNNT |
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SOX10/MA0442.1/Jaspar
Match Rank: | 10 |
Score: | 0.63 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | CTGCCTCCTTTGT -------CTTTGT |
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