Information for 4-CCAAAGCCCCAACTHC (Motif 12)

A G T C A G T C G T C A C G T A C T G A A C T G A G T C A G T C A G T C A G T C G T C A C G T A A G T C A C G T G C T A A T G C
Reverse Opposite:
A T C G C A G T G T C A C T A G C G A T A C G T C T A G A C T G C T A G A C T G G T A C A G C T A C G T A C G T A C T G A C T G
p-value:1e-9
log p-value:-2.218e+01
Information Content per bp:1.813
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.2 +/- 27.4bp
Average Position of motif in Background56.5 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RREB1/MA0073.1/Jaspar

Match Rank:1
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCAAAGCCCCAACTHC--
CCCCAAACCACCCCCCCCCA
 A C G T A C G T A G T C A G T C G T C A C G T A C T G A A C T G A G T C A G T C A G T C A G T C G T C A C G T A A G T C A C G T G C T A A T G C A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCAAAGCCCCAACTHC
---AAGACCCYYN---
 A G T C A G T C G T C A C G T A C T G A A C T G A G T C A G T C A G T C A G T C G T C A C G T A A G T C A C G T G C T A A T G C
A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T A C G T

SP3/MA0746.1/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCAAAGCCCCAACTHC
GCCACGCCCCC-----
 A G T C A G T C G T C A C G T A C T G A A C T G A G T C A G T C A G T C A G T C G T C A C G T A A G T C A C G T G C T A A T G C
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CCAAAGCCCCAACTHC
AGAGTCCAAAGTCCA------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T C A C G T A C T G A A C T G A G T C A G T C A G T C A G T C G T C A C G T A A G T C A C G T G C T A A T G C
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

KLF16/MA0741.1/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCAAAGCCCCAACTHC
GCCACGCCCCC-----
 A G T C A G T C G T C A C G T A C T G A A C T G A G T C A G T C A G T C A G T C G T C A C G T A A G T C A C G T G C T A A T G C
T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CCAAAGCCCCAACTHC
-----GCTCCG-----
 A G T C A G T C G T C A C G T A C T G A A C T G A G T C A G T C A G T C A G T C G T C A C G T A A G T C A C G T G C T A A T G C
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------CCAAAGCCCCAACTHC
CANAGNNCAAAGTCCA------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T C A C G T A C T G A A C T G A G T C A G T C A G T C A G T C G T C A C G T A A G T C A C G T G C T A A T G C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0100.1_Zfp740_1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CCAAAGCCCCAACTHC
CCCCCCCCCCCACTTG
 A G T C A G T C G T C A C G T A C T G A A C T G A G T C A G T C A G T C A G T C G T C A C G T A A G T C A C G T G C T A A T G C
A G T C T A G C A G T C T A G C T G A C G T A C G T A C G A T C G A T C G T A C G T A C G T C A G T A C G C A T G A C T A T C G

SP4/MA0685.1/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CCAAAGCCCCAACTHC
TAAGCCACGCCCCCTTT--
 A C G T A C G T A C G T A G T C A G T C G T C A C G T A C T G A A C T G A G T C A G T C A G T C A G T C G T C A C G T A A G T C A C G T G C T A A T G C
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T A C G T A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CCAAAGCCCCAACTHC
TCCCCCCCCCCCCCC---
 A C G T A C G T A G T C A G T C G T C A C G T A C T G A A C T G A G T C A G T C A G T C A G T C G T C A C G T A A G T C A C G T G C T A A T G C
C A G T A G T C G T A C G T A C T A G C G T A C G A T C G A T C G T A C G A T C G T A C G T A C G T A C G A T C T G A C A C G T A C G T A C G T