Information for 7-TCTCACCAGGAGC (Motif 8)

A C G T A G T C A C G T A G T C C G T A G T A C A G T C C G T A C T A G A C T G C G T A A C T G G T A C
Reverse Opposite:
A C T G A G T C A C G T A G T C A G T C A C G T A C T G A C T G A C G T C T A G C G T A A C T G C G T A
p-value:1e-10
log p-value:-2.482e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.8 +/- 29.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCTCACCAGGAGC
-CACAGCAGGGGG
 A C G T A G T C A C G T A G T C C G T A G T A C A G T C C G T A C T A G A C T G C G T A A C T G G T A C
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCTCACCAGGAGC--
DCHCAGCAGGRGGCC
 A C G T A G T C A C G T A G T C C G T A G T A C A G T C C G T A C T A G A C T G C G T A A C T G G T A C A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCTCACCAGGAGC
CCACACAGCAGGAGA
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A G T A C A G T C C G T A C T A G A C T G C G T A A C T G G T A C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCTCACCAGGAGC-----
-ATCCACAGGTGCGAAAA
 A C G T A G T C A C G T A G T C C G T A G T A C A G T C C G T A C T A G A C T G C G T A A C T G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCTCACCAGGAGC
CCACACAGCAGGAGA
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A G T A C A G T C C G T A C T A G A C T G C G T A A C T G G T A C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCTCACCAGGAGC
DCTCAGCAGG---
 A C G T A G T C A C G T A G T C C G T A G T A C A G T C C G T A C T A G A C T G C G T A A C T G G T A C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCTCACCAGGAGC
GAGCACAGCAGGACA
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A G T A C A G T C C G T A C T A G A C T G C G T A A C T G G T A C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TCTCACCAGGAGC-
----ANCAGGATGT
 A C G T A G T C A C G T A G T C C G T A G T A C A G T C C G T A C T A G A C T G C G T A A C T G G T A C A C G T
A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCTCACCAGGAGC----
-ATTTACAGTAGCAAAA
 A C G T A G T C A C G T A G T C C G T A G T A C A G T C C G T A C T A G A C T G C G T A A C T G G T A C A C G T A C G T A C G T A C G T
A C G T G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TCTCACCAGGAGC
-------CGGAGC
 A C G T A G T C A C G T A G T C C G T A G T A C A G T C C G T A C T A G A C T G C G T A A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C