Information for 3-WGCAAWTTGTAWTYMA (Motif 5)

C G A T A C T G G T A C C G T A G T C A C G A T A G C T A C G T A C T G A C G T C T G A C G A T C G A T G A T C G T C A T C G A
Reverse Opposite:
A G C T A C G T C T A G C G T A G C T A A G C T G T C A G T A C C G T A T C G A C G T A A C G T A C G T C A T G G T A C C G T A
p-value:1e-13
log p-value:-3.008e+01
Information Content per bp:1.684
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif18.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets61.5 +/- 22.2bp
Average Position of motif in Background48.8 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---WGCAAWTTGTAWTYMA
CCTTGCAATTTTTNN----
 A C G T A C G T A C G T C G A T A C T G G T A C C G T A G T C A C G A T A G C T A C G T A C T G A C G T C T G A C G A T C G A T G A T C G T C A T C G A
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T A C G T A C G T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:WGCAAWTTGTAWTYMA----
---NNNTTTTAATTAANNNN
 C G A T A C T G G T A C C G T A G T C A C G A T A G C T A C G T A C T G A C G T C T G A C G A T C G A T G A T C G T C A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

PH0075.1_Hoxd10/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:WGCAAWTTGTAWTYMA--
-NTNAATTTTATTGNATT
 C G A T A C T G G T A C C G T A G T C A C G A T A G C T A C G T A C T G A C G T C T G A C G A T C G A T G A T C G T C A T C G A A C G T A C G T
A C G T C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:WGCAAWTTGTAWTYMA
--TATTGTTTATT---
 C G A T A C T G G T A C C G T A G T C A C G A T A G C T A C G T A C T G A C G T C T G A C G A T C G A T G A T C G T C A T C G A
A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:WGCAAWTTGTAWTYMA-
--NNNTTTNTAATACNG
 C G A T A C T G G T A C C G T A G T C A C G A T A G C T A C G T A C T G A C G T C T G A C G A T C G A T G A T C G T C A T C G A A C G T
A C G T A C G T C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PH0100.1_Lmx1a/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:WGCAAWTTGTAWTYMA----
---NNTTTTTAATTAATTCG
 C G A T A C T G G T A C C G T A G T C A C G A T A G C T A C G T A C T G A C G T C T G A C G A T C G A T G A T C G T C A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:WGCAAWTTGTAWTYMA
TGGACTTTGNNCTCN-
 C G A T A C T G G T A C C G T A G T C A C G A T A G C T A C G T A C T G A C G T C T G A C G A T C G A T G A T C G T C A T C G A
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:WGCAAWTTGTAWTYMA----
---AGTTTTTAATTAATTTG
 C G A T A C T G G T A C C G T A G T C A C G A T A G C T A C G T A C T G A C G T C T G A C G A T C G A T G A T C G T C A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:WGCAAWTTGTAWTYMA
TGGACTTTGNNCTNTG
 C G A T A C T G G T A C C G T A G T C A C G A T A G C T A C G T A C T G A C G T C T G A C G A T C G A T G A T C G T C A T C G A
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PB0064.1_Sox14_1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:WGCAAWTTGTAWTYMA-
-GCTAATTATAATTATC
 C G A T A C T G G T A C C G T A G T C A C G A T A G C T A C G T A C T G A C G T C T G A C G A T C G A T G A T C G T C A T C G A A C G T
A C G T C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C