Information for 5-TTTGAAATTCCAC (Motif 4)

A C G T A G C T A G C T C T A G T C G A C G T A C G T A G C A T A C G T A G T C G T A C G C T A T A G C
Reverse Opposite:
A T C G C G A T A C T G A C T G G T C A C G T A A C G T A C G T A C G T A G T C C T G A T C G A G T C A
p-value:1e-14
log p-value:-3.245e+01
Information Content per bp:1.787
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.3 +/- 22.8bp
Average Position of motif in Background60.9 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTTGAAATTCCAC
TTTGAAACCG---
 A C G T A G C T A G C T C T A G T C G A C G T A C G T A G C A T A C G T A G T C G T A C G C T A T A G C
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TTTGAAATTCCAC
--GGAAATTCCC-
 A C G T A G C T A G C T C T A G T C G A C G T A C G T A G C A T A C G T A G T C G T A C G C T A T A G C
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TTTGAAATTCCAC-
----GCATTCCAGN
 A C G T A G C T A G C T C T A G T C G A C G T A C G T A G C A T A C G T A G T C G T A C G C T A T A G C A C G T
A C G T A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TTTGAAATTCCAC
--GGAAATTCCC-
 A C G T A G C T A G C T C T A G T C G A C G T A C G T A G C A T A C G T A G T C G T A C G C T A T A G C
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TTTGAAATTCCAC
---CACATTCCAT
 A C G T A G C T A G C T C T A G T C G A C G T A C G T A G C A T A C G T A G T C G T A C G C T A T A G C
A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TTTGAAATTCCAC-
----RCATTCCWGG
 A C G T A G C T A G C T C T A G T C G A C G T A C G T A G C A T A C G T A G T C G T A C G C T A T A G C A C G T
A C G T A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTTGAAATTCCAC---
GGCAAAAGTCCAATAA
 A C G T A G C T A G C T C T A G T C G A C G T A C G T A G C A T A C G T A G T C G T A C G C T A T A G C A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PB0169.1_Sox15_2/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TTTGAAATTCCAC
TTGAATGAAATTCGA-
 A C G T A C G T A C G T A C G T A G C T A G C T C T A G T C G A C G T A C G T A G C A T A C G T A G T C G T A C G C T A T A G C
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TTTGAAATTCCAC
----ACATTCCA-
 A C G T A G C T A G C T C T A G T C G A C G T A C G T A G C A T A C G T A G T C G T A C G C T A T A G C
A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TTTGAAATTCCAC-
----RCATTCCWGG
 A C G T A G C T A G C T C T A G T C G A C G T A C G T A G C A T A C G T A G T C G T A C G C T A T A G C A C G T
A C G T A C G T A C G T A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G