Information for 4-GGGCTCCCTCTGC (Motif 2)

A C T G C T A G A C T G A G T C C G A T A T G C A G T C A G T C A G C T A T G C A C G T A C T G A T G C
Reverse Opposite:
A T C G G T A C T C G A A T C G T C G A A C T G T A C G A T C G G C T A C T A G A G T C G A T C T G A C
p-value:1e-29
log p-value:-6.712e+01
Information Content per bp:1.752
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.78%
Number of Background Sequences with motif101.5
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets53.2 +/- 26.9bp
Average Position of motif in Background45.8 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGGCTCCCTCTGC
NNNGGGGCGCCCCCNN-
 A C G T A C G T A C G T A C G T A C T G C T A G A C T G A G T C C G A T A T G C A G T C A G T C A G C T A T G C A C G T A C T G A T G C
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGGCTCCCTCTGC
--GCTCCG-----
 A C T G C T A G A C T G A G T C C G A T A T G C A G T C A G T C A G C T A T G C A C G T A C T G A T G C
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGGCTCCCTCTGC----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C T G C T A G A C T G A G T C C G A T A T G C A G T C A G T C A G C T A T G C A C G T A C T G A T G C A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGGCTCCCTCTGC
CNGTCCTCCC-----
 A C G T A C G T A C T G C T A G A C T G A G T C C G A T A T G C A G T C A G T C A G C T A T G C A C G T A C T G A T G C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGGCTCCCTCTGC
-NGCTN-------
 A C T G C T A G A C T G A G T C C G A T A T G C A G T C A G T C A G C T A T G C A C G T A C T G A T G C
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGGCTCCCTCTGC
AGGGGATTCCCCT--
 A C G T A C G T A C T G C T A G A C T G A G T C C G A T A T G C A G T C A G T C A G C T A T G C A C G T A C T G A T G C
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGGCTCCCTCTGC
-GGCGCGCT----
 A C T G C T A G A C T G A G T C C G A T A T G C A G T C A G T C A G C T A T G C A C G T A C T G A T G C
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGGCTCCCTCTGC
AGGGGATTCCCCT--
 A C G T A C G T A C T G C T A G A C T G A G T C C G A T A T G C A G T C A G T C A G C T A T G C A C G T A C T G A T G C
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTCCCTCTGC
GGGGATTCCCCC--
 A C G T A C T G C T A G A C T G A G T C C G A T A T G C A G T C A G T C A G C T A T G C A C G T A C T G A T G C
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGGCTCCCTCTGC
-GGCTCYAKCAYC
 A C T G C T A G A C T G A G T C C G A T A T G C A G T C A G T C A G C T A T G C A C G T A C T G A T G C
A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C