Information for 12-AGGCACGCTG (Motif 15)

C G T A A C T G A C T G A G T C C G T A A G T C A C T G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A G T C A C T G A C G T A C T G A G T C A G T C A C G T
p-value:1e-5
log p-value:-1.282e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.0 +/- 24.1bp
Average Position of motif in Background67.7 +/- 9.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AGGCACGCTG
---CACGCA-
 C G T A A C T G A C T G A G T C C G T A A G T C A C T G A G T C A C G T A C T G
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGGCACGCTG
-GGCGCGCT-
 C G T A A C T G A C T G A G T C C G T A A G T C A C T G A G T C A C G T A C T G
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGGCACGCTG
TBGCACGCAA
 C G T A A C T G A C T G A G T C C G T A A G T C A C T G A G T C A C G T A C T G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AGGCACGCTG---
---CCTGCTGAGH
 C G T A A C T G A C T G A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGGCACGCTG-
-GGCACGCGTC
 C G T A A C T G A C T G A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T
A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGGCACGCTG-----
NNTCCTGCTGTGNNN
 C G T A A C T G A C T G A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGCACGCTG
AAGGCAAGTGT
 A C G T C G T A A C T G A C T G A G T C C G T A A G T C A C T G A G T C A C G T A C T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGGCACGCTG
--GCACGTNC
 C G T A A C T G A C T G A G T C C G T A A G T C A C T G A G T C A C G T A C T G
A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGGCACGCTG-----
TCNCCTGCTGNGNNN
 C G T A A C T G A C T G A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0147.1_Max_2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGCACGCTG---
GTGCCACGCGACTG
 A C G T C G T A A C T G A C T G A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G