Information for 4-AYTGRGGGCAGCATTC (Motif 4)

G T C A A G C T G C A T A C T G T C G A C A T G A C T G A T C G A G T C C T G A A C T G A G T C C G T A A C G T A C G T A T G C
Reverse Opposite:
A T C G T C G A C G T A A C G T C T A G A G T C A G C T A C T G A T G C G T A C G A T C A G C T A G T C C G T A T C G A A C G T
p-value:1e-13
log p-value:-3.168e+01
Information Content per bp:1.714
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.9 +/- 13.2bp
Average Position of motif in Background70.8 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AYTGRGGGCAGCATTC
--TNNGGGCAG-----
 G T C A A G C T G C A T A C T G T C G A C A T G A C T G A T C G A G T C C T G A A C T G A G T C C G T A A C G T A C G T A T G C
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:2
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AYTGRGGGCAGCATTC
NNNATTGGGGGTNTCCT--
 A C G T A C G T A C G T G T C A A G C T G C A T A C T G T C G A C A T G A C T G A T C G A G T C C T G A A C T G A G T C C G T A A C G T A C G T A T G C
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------AYTGRGGGCAGCATTC
TGGCCACCAGGTGGCACTNT--
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G C T G C A T A C T G T C G A C A T G A C T G A T C G A G T C C T G A A C T G A G T C C G T A A C G T A C G T A T G C
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AYTGRGGGCAGCATTC---
-----TGGCAGNCTGCCAG
 G T C A A G C T G C A T A C T G T C G A C A T G A C T G A T C G A G T C C T G A A C T G A G T C C G T A A C G T A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AYTGRGGGCAGCATTC
--NGTGGGCAT-----
 G T C A A G C T G C A T A C T G T C G A C A T G A C T G A T C G A G T C C T G A A C T G A G T C C G T A A C G T A C G T A T G C
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.52
Offset:8
Orientation:forward strand
Alignment:AYTGRGGGCAGCATTC
--------CAGCC---
 G T C A A G C T G C A T A C T G T C G A C A T G A C T G A T C G A G T C C T G A A C T G A G T C C G T A A C G T A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AYTGRGGGCAGCATTC
--TRAGGTCA------
 G T C A A G C T G C A T A C T G T C G A C A T G A C T G A T C G A G T C C T G A A C T G A G T C C G T A A C G T A C G T A T G C
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----AYTGRGGGCAGCATTC
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T G T C A A G C T G C A T A C T G T C G A C A T G A C T G A T C G A G T C C T G A A C T G A G T C C G T A A C G T A C G T A T G C
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0010.1_Egr1_1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AYTGRGGGCAGCATTC
ANTGCGGGGGCGGN----
 A C G T A C G T G T C A A G C T G C A T A C T G T C G A C A T G A C T G A T C G A G T C C T G A A C T G A G T C C G T A A C G T A C G T A T G C
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:AYTGRGGGCAGCATTC
------CACAGN----
 G T C A A G C T G C A T A C T G T C G A C A T G A C T G A T C G A G T C C T G A A C T G A G T C C G T A A C G T A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T