Information for 7-CCASCSGCCGCYG (Motif 12)

A T G C T G A C T C G A A T C G A T G C A T C G T A C G A T G C T A G C C A T G T G A C A G C T A T C G
Reverse Opposite:
A T G C C T G A A C T G G T A C A T C G T A C G A T G C T A G C A T C G A T G C A G C T A C T G A T C G
p-value:1e-21
log p-value:-4.885e+01
Information Content per bp:1.652
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets45.9 +/- 26.4bp
Average Position of motif in Background43.0 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myod1/MA0499.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCASCSGCCGCYG
TGCAGCTGTCCCT-
 A C G T A T G C T G A C T C G A A T C G A T G C A T C G T A C G A T G C T A G C C A T G T G A C A G C T A T C G
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCASCSGCCGCYG
CGACCAACTGCCGTG-
 A C G T A C G T A C G T A T G C T G A C T C G A A T C G A T G C A T C G T A C G A T G C T A G C C A T G T G A C A G C T A T C G
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCASCSGCCGCYG
NNVCAGCTGB-----
 A C G T A C G T A T G C T G A C T C G A A T C G A T G C A T C G T A C G A T G C T A G C C A T G T G A C A G C T A T C G
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCASCSGCCGCYG
NNGCAGCTGTC----
 A C G T A C G T A T G C T G A C T C G A A T C G A T G C A T C G T A C G A T G C T A G C C A T G T G A C A G C T A T C G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCASCSGCCGCYG
SNGCACCTGCHS---
 A C G T A C G T A T G C T G A C T C G A A T C G A T G C A T C G T A C G A T G C T A G C C A T G T G A C A G C T A T C G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCASCSGCCGCYG
NVCAGCTGBBNN--
 A C G T A T G C T G A C T C G A A T C G A T G C A T C G T A C G A T G C T A G C C A T G T G A C A G C T A T C G
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCASCSGCCGCYG
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A T G C T G A C T C G A A T C G A T G C A T C G T A C G A T G C T A G C C A T G T G A C A G C T A T C G
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCASCSGCCGCYG
GCCAGCTGBTNB--
 A C G T A T G C T G A C T C G A A T C G A T G C A T C G T A C G A T G C T A G C C A T G T G A C A G C T A T C G
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCASCSGCCGCYG
NCAGCTGCTG---
 A T G C T G A C T C G A A T C G A T G C A T C G T A C G A T G C T A G C C A T G T G A C A G C T A T C G
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCASCSGCCGCYG
NNACAGCTGC-----
 A C G T A C G T A T G C T G A C T C G A A T C G A T G C A T C G T A C G A T G C T A G C C A T G T G A C A G C T A T C G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T