p-value: | 1e-11 |
log p-value: | -2.621e+01 |
Information Content per bp: | 1.698 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 1.03% |
Number of Background Sequences with motif | 12.7 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 69.1 +/- 16.5bp |
Average Position of motif in Background | 49.2 +/- 24.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTTAGCWAGGRAA CACAGCAGGGGG- |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 2 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CTTAGCWAGGRAA CCGCATAGCAACGGA- |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CTTAGCWAGGRAA-- -----CAAGGHCANV |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CTTAGCWAGGRAA --WDNCTGGGCA- |
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Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTTAGCWAGGRAA-- KGTTGCTAGGMAACA |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CTTAGCWAGGRAA TACCATAGCAACGGT- |
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HMBOX1/MA0895.1/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTTAGCWAGGRAA GTTAACTAGN--- |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------CTTAGCWAGGRAA--- TGTGACCCTTAGCAACCGATTAA |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTTAGCWAGGRAA ---AAYTAGGTCA |
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PB0159.1_Rfx4_2/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTTAGCWAGGRAA NNNGTAACTANGNNA |
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