Information for 13-GGCGTCACGT (Motif 19)

A C T G T A C G T A G C C T A G G A C T A G T C T G C A T G A C A T C G A C G T
Reverse Opposite:
T G C A T A G C A C T G A C G T T C A G C T G A A G T C A T C G A T G C G T A C
p-value:1e-9
log p-value:-2.191e+01
Information Content per bp:1.686
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif5.93%
Number of Background Sequences with motif1000.3
Percentage of Background Sequences with motif2.20%
Average Position of motif in Targets50.5 +/- 25.8bp
Average Position of motif in Background49.8 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E-box(bHLH)/Promoter/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GGCGTCACGT--
CCGGTCACGTGA
 A C T G T A C G T A G C C T A G G A C T A G T C T G C A T G A C A T C G A C G T A C G T A C G T
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GGCGTCACGT--
--GGTCACGTGC
 A C T G T A C G T A G C C T A G G A C T A G T C T G C A T G A C A T C G A C G T A C G T A C G T
A C G T A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GGCGTCACGT--
--GGTCACGTGA
 A C T G T A C G T A G C C T A G G A C T A G T C T G C A T G A C A T C G A C G T A C G T A C G T
A C G T A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

BHLHE41/MA0636.1/Jaspar

Match Rank:4
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GGCGTCACGT---
---GTCACGTGAC
 A C T G T A C G T A G C C T A G G A C T A G T C T G C A T G A C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C

CREB1/MA0018.2/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGCGTCACGT
TGACGTCA---
 A C G T A C T G T A C G T A G C C T A G G A C T A G T C T G C A T G A C A T C G A C G T
G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGCGTCACGT----
NNGGCGACACCTCNNN
 A C G T A C G T A C T G T A C G T A G C C T A G G A C T A G T C T G C A T G A C A T C G A C G T A C G T A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

TFEB/MA0692.1/Jaspar

Match Rank:7
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GGCGTCACGT---
---GTCACGTGAT
 A C T G T A C G T A G C C T A G G A C T A G T C T G C A T G A C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

USF1/MA0093.2/Jaspar

Match Rank:8
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GGCGTCACGT---
--GGTCACGTGGC
 A C T G T A C G T A G C C T A G G A C T A G T C T G C A T G A C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

PB0057.1_Rxra_1/Jaspar

Match Rank:9
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GGCGTCACGT--
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A C G T A C T G T A C G T A G C C T A G G A C T A G T C T G C A T G A C A T C G A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GGCGTCACGT-
---GHCACGTG
 A C T G T A C G T A G C C T A G G A C T A G T C T G C A T G A C A T C G A C G T A C G T
A C G T A C G T A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G