Information for 11-ACGCGTTGCT (Motif 17)

C G T A G T A C A C T G A G T C A C T G A G C T A C G T A C T G A G T C A C G T
Reverse Opposite:
C G T A C T A G T G A C C G T A C T G A T G A C A C T G A G T C A C T G A C G T
p-value:1e-9
log p-value:-2.249e+01
Information Content per bp:1.863
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif35.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets53.4 +/- 24.1bp
Average Position of motif in Background53.4 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ACGCGTTGCT------
-NCCGTTGCTANGNGN
 C G T A G T A C A C T G A G T C A C T G A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACGCGTTGCT------
-NNCGTTGCTATGGNN
 C G T A G T A C A C T G A G T C A C T G A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACGCGTTGCT----------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T C G T A G T A C A C T G A G T C A C T G A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACGCGTTGCT
CACGCA-----
 A C G T C G T A G T A C A C T G A G T C A C T G A G C T A C G T A C T G A G T C A C G T
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACGCGTTGCT-
CCACCTGTTGCAT
 A C G T A C G T C G T A G T A C A C T G A G T C A C T G A G C T A C G T A C T G A G T C A C G T A C G T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

SCRT1/MA0743.1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ACGCGTTGCT-
ANCCACCTGTTGCNC
 A C G T A C G T A C G T A C G T C G T A G T A C A C T G A G T C A C T G A G C T A C G T A C T G A G T C A C G T A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ACGCGTTGCT--
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T A C G T C G T A G T A C A C T G A G T C A C T G A G C T A C G T A C T G A G T C A C G T A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACGCGTTGCT--
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T C G T A G T A C A C T G A G T C A C T G A G C T A C G T A C T G A G T C A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PAX5/MA0014.2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACGCGTTGCT------
GTCACGCTTGGCTGCNCNN
 A C G T A C G T A C G T C G T A G T A C A C T G A G T C A C T G A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

Hes1/MA1099.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACGCGTTGCT
GGCACGCGTC---
 A C G T A C G T A C G T C G T A G T A C A C T G A G T C A C T G A G C T A C G T A C T G A G T C A C G T
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T A C G T A C G T