Information for 13-CTAGSCGGWG (Motif 21)

A G T C A C G T C G T A A C T G A T C G G T A C A C T G T A C G C G A T A C T G
Reverse Opposite:
A G T C C G T A A T G C A G T C A C T G A T G C A G T C A C G T C G T A C T A G
p-value:1e-6
log p-value:-1.462e+01
Information Content per bp:1.844
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif61.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets47.8 +/- 18.5bp
Average Position of motif in Background44.9 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTAGSCGGWG
TGTCTAGACG---
 A C G T A C G T A C G T A G T C A C G T C G T A A C T G A T C G G T A C A C T G T A C G C G A T A C T G
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTAGSCGGWG-
RGKGGGCGGAGC
 A C G T A G T C A C G T C G T A A C T G A T C G G T A C A C T G T A C G C G A T A C T G A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTAGSCGGWG
CTAGGCCT--
 A G T C A C G T C G T A A C T G A T C G G T A C A C T G T A C G C G A T A C T G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTAGSCGGWG
GGAGGGGGAA
 A G T C A C G T C G T A A C T G A T C G G T A C A C T G T A C G C G A T A C T G
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CTAGSCGGWG----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A G T C A C G T C G T A A C T G A T C G G T A C A C T G T A C G C G A T A C T G A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTAGSCGGWG---
-SDGCAGGTGCNS
 A G T C A C G T C G T A A C T G A T C G G T A C A C T G T A C G C G A T A C T G A C G T A C G T A C G T
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTAGSCGGWG--
--AGCAGCTGCT
 A G T C A C G T C G T A A C T G A T C G G T A C A C T G T A C G C G A T A C T G A C G T A C G T
A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CTAGSCGGWG----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A G T C A C G T C G T A A C T G A T C G G T A C A C T G T A C G C G A T A C T G A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CTAGSCGGWG-----
ATTGCCTCAGGCAAT
 A G T C A C G T C G T A A C T G A T C G G T A C A C T G T A C G C G A T A C T G A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CTAGSCGGWG-----
NNNNAGCAGCTGCTGAN
 A C G T A C G T A G T C A C G T C G T A A C T G A T C G G T A C A C T G T A C G C G A T A C T G A C G T A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G