Homer de novo Motif Results (hs_LungEmbryonic_MRC5_undef_HA_SRX1477662_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 662
Total background sequences = 47788
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T A G A C T G A C T G A C T G C A T G A C T G A C T G C T A G G T C A G A C T A G C T A C G T A C G T A T G C A C G T A T G C 1e-15-3.615e+011.21%0.01%24.8bp (18.4bp)NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer(0.567)
More Information | Similar Motifs Found
motif file (matrix)
2 A C G T C T A G A T C G C G T A G A C T G T A C A G T C A C T G A T G C A C G T A G T C A C G T A T C G T C A G A C T G G T A C 1e-14-3.329e+011.51%0.03%16.7bp (17.1bp)POL011.1_XCPE1/Jaspar(0.565)
More Information | Similar Motifs Found
motif file (matrix)
3 * C G T A A T C G C T G A A G T C C G T A C T A G T G C A C G T A C A G T T A C G A C G T A C G T C A T G T C A G A C G T A G T C 1e-11-2.743e+011.21%0.02%22.4bp (16.3bp)Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer(0.588)
More Information | Similar Motifs Found
motif file (matrix)
4 * A C T G A G T C A C G T A C T G A T G C A C T G A C T G C T G A G T C A A G T C C G T A A C T G A G T C 1e-11-2.622e+010.76%0.00%28.5bp (0.0bp)ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer(0.632)
More Information | Similar Motifs Found
motif file (matrix)
5 * C G T A A C T G C T A G A C G T A C T G A C T G A C T G A C G T A T C G G T A C C G T A C T G A T C G A A C T G A C T G A T C G 1e-11-2.622e+010.76%0.00%25.4bp (0.0bp)PLAG1/MA0163.1/Jaspar(0.539)
More Information | Similar Motifs Found
motif file (matrix)
6 * A G T C A T C G C G T A A C T G A G C T T G A C A C T G A C G T A C T G A C T G G T C A A C T G A C T G A T G C A G C T A C T G 1e-11-2.622e+010.76%0.00%19.8bp (0.0bp)ZNF354C/MA0130.1/Jaspar(0.590)
More Information | Similar Motifs Found
motif file (matrix)
7 * C T A G A C G T C T A G A C T G A G T C C T G A C T A G A C T G A T G C A T G C C G T A A G C T C T A G A C T G A C T G G T C A 1e-11-2.622e+010.76%0.00%20.0bp (0.0bp)Zfx/MA0146.2/Jaspar(0.524)
More Information | Similar Motifs Found
motif file (matrix)
8 * A G T C G T A C A G T C C G T A A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A A T C G C G T A A C G T A C T G 1e-11-2.622e+010.76%0.00%22.8bp (0.0bp)ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer(0.581)
More Information | Similar Motifs Found
motif file (matrix)
9 * C G A T A C T G C T G A G T A C A G T C C T G A C T A G A C G T C T A G A T C G A G T C A C G T A G T C A G T C C G A T A T G C 1e-11-2.573e+010.91%0.01%25.7bp (3.3bp)PB0050.1_Osr1_1/Jaspar(0.581)
More Information | Similar Motifs Found
motif file (matrix)
10 * A C T G A C T G A G T C A G C T A G T C C G A T A G T C A G T C C G A T A G T C A G T C A C G T A T C G 1e-10-2.467e+011.51%0.06%23.8bp (28.8bp)ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer(0.617)
More Information | Similar Motifs Found
motif file (matrix)
11 * A G C T A T C G A C T G A C T G A T G C A C G T T A G C A G T C G C A T A G T C G T A C G T A C G T C A 1e-10-2.450e+013.02%0.43%27.7bp (29.3bp)Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer(0.644)
More Information | Similar Motifs Found
motif file (matrix)
12 * A G T C C G T A A C G T A G T C A C G T A G T C C G A T A C T G A G T C C G T A G A C T A G T C C G T A 1e-10-2.402e+010.91%0.01%32.4bp (24.0bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.638)
More Information | Similar Motifs Found
motif file (matrix)
13 * G T A C G T A C G T A C A T C G A G T C A C G T A G T C C T G A G T A C A G T C A G T C A G C T A T G C C T A G G T C A A G T C 1e-10-2.402e+010.91%0.01%23.2bp (18.8bp)ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer(0.626)
More Information | Similar Motifs Found
motif file (matrix)
14 * C G T A C T G A A G T C G T C A A T C G G C T A A C G T C T A G T A G C T G A C 1e-10-2.338e+013.93%0.80%26.4bp (32.6bp)NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer(0.801)
More Information | Similar Motifs Found
motif file (matrix)
15 * G T C A G T A C A C T G A G T C A G C T A C T G G T C A A C G T A G T C G A C T A C T G A T G C A G C T T C A G A C G T A C T G 1e-10-2.325e+011.06%0.02%30.0bp (19.0bp)Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer(0.551)
More Information | Similar Motifs Found
motif file (matrix)
16 * A C T G A G T C C G T A A C T G C T G A C G A T A C T G A G T C C T A G A C T G A G T C C G T A A T C G A G T C A G C T A G T C 1e-9-2.277e+010.76%0.01%22.1bp (0.0bp)MAFG/MA0659.1/Jaspar(0.626)
More Information | Similar Motifs Found
motif file (matrix)
17 * A T G C C G T A A C T G C T A G A C T G A C T G A C G T A T C G C T G A A G T C A G T C C G T A A C T G A G T C A G C T A G C T 1e-9-2.277e+010.76%0.00%33.0bp (30.8bp)PB0118.1_Esrra_2/Jaspar(0.628)
More Information | Similar Motifs Found
motif file (matrix)
18 * A C T G G T A C A G T C C T A G A C T G A T G C A C T G A C T G A G T C A G C T A G T C G T A C A C T G 1e-9-2.269e+010.91%0.01%17.4bp (28.6bp)PB0190.1_Tcfap2b_2/Jaspar(0.693)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C G T A C T G T A C G G T A C A T G C C G A T T C A G G T A C T A C G C G A T 1e-9-2.263e+014.38%1.03%28.1bp (32.9bp)Zfx/MA0146.2/Jaspar(0.570)
More Information | Similar Motifs Found
motif file (matrix)
20 * A T C G A C T G A C G T A C T G A G T C C G T A T A C G G T C A A G C T A C T G A G T C C G T A A G T C C G A T A C T G A G T C 1e-9-2.164e+011.96%0.18%20.9bp (29.0bp)NHLH1/MA0048.2/Jaspar(0.595)
More Information | Similar Motifs Found
motif file (matrix)
21 * G A T C G C A T A G T C T G A C G T C A G T A C T G A C G T C A T G C A A C T G 1e-9-2.132e+0116.77%9.18%25.2bp (29.2bp)ZNF354C/MA0130.1/Jaspar(0.725)
More Information | Similar Motifs Found
motif file (matrix)
22 * A C G T A C T G A T G C A G T C A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G 1e-8-2.032e+010.60%0.00%21.0bp (0.0bp)THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer(0.646)
More Information | Similar Motifs Found
motif file (matrix)
23 * A G T C A G T C A C G T C G T A C G T A C G T A A T G C A T C G C G T A A T C G C T A G A C G T A G T C G T C A A T C G C G T A 1e-8-2.032e+010.60%0.00%18.5bp (0.0bp)RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer(0.650)
More Information | Similar Motifs Found
motif file (matrix)
24 * A C T G G T A C A G T C C G T A A T C G A C G T A C T G C G A T C G T A A C T G A G T C A G T C C G A T 1e-8-1.975e+011.06%0.03%22.9bp (27.1bp)PB0195.1_Zbtb3_2/Jaspar(0.610)
More Information | Similar Motifs Found
motif file (matrix)
25 * A G C T C G A T A G C T A C G T A C T G A G C T A C T G A T G C G C A T T C G A A T C G C G T A A T C G 1e-8-1.932e+010.76%0.01%23.1bp (14.0bp)PB0208.1_Zscan4_2/Jaspar(0.605)
More Information | Similar Motifs Found
motif file (matrix)
26 * A C G T A C T G G T C A A C G T A T G C C G T A G T A C A G T C T C A G A C G T 1e-8-1.912e+011.51%0.11%30.6bp (30.0bp)PH0016.1_Cux1_1/Jaspar(0.690)
More Information | Similar Motifs Found
motif file (matrix)
27 * C T G A C T G A A T G C A G C T A G T C A C G T A C T G A C G T T A C G A T C G A C T G C T A G A G T C 1e-7-1.807e+011.36%0.09%24.1bp (25.4bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.605)
More Information | Similar Motifs Found
motif file (matrix)
28 * A T C G A G C T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A G T C G T C A A C G T 1e-7-1.756e+010.60%0.00%29.9bp (16.1bp)POU3F4/MA0789.1/Jaspar(0.548)
More Information | Similar Motifs Found
motif file (matrix)
29 * C T A G C T A G A G C T C G T A A C G T A T C G C A T G C G A T G T A C T A G C 1e-7-1.753e+013.02%0.65%27.0bp (26.7bp)TEAD3/MA0808.1/Jaspar(0.641)
More Information | Similar Motifs Found
motif file (matrix)
30 * T A C G A G C T A G T C A C G T A G T C A G T C A G C T A C G T A G T C A G T C A C G T A G T C G T C A 1e-7-1.732e+010.76%0.01%26.8bp (25.4bp)ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer(0.699)
More Information | Similar Motifs Found
motif file (matrix)
31 * C A T G A G C T C G T A C T G A G T A C A G T C C G T A A C T G G T A C G T C A 1e-7-1.715e+011.06%0.05%22.0bp (29.5bp)Foxo1/MA0480.1/Jaspar(0.719)
More Information | Similar Motifs Found
motif file (matrix)
32 * A G T C A G T C A G T C C G A T A C T G G T A C G T A C A G T C C G A T A C T G A T G C A G T C A G T C 1e-7-1.641e+011.66%0.19%27.2bp (25.4bp)POL003.1_GC-box/Jaspar(0.688)
More Information | Similar Motifs Found
motif file (matrix)
33 * A T G C A C T G A T G C A C T G A T C G A C T G T A C G T A G C A T C G A T G C A G T C A G T C G A T C 1e-6-1.545e+011.96%0.30%30.8bp (26.5bp)PB0052.1_Plagl1_1/Jaspar(0.843)
More Information | Similar Motifs Found
motif file (matrix)
34 * A C T G C G T A A G T C A G T C T A C G C T G A A G T C A C G T A G T C A C G T A C T G C T A G A C T G A C T G A C T G A C T G 1e-6-1.465e+010.45%0.00%14.4bp (0.0bp)GLIS2/MA0736.1/Jaspar(0.574)
More Information | Similar Motifs Found
motif file (matrix)
35 * G T A C G T C A A G T C A C G T T A G C G T C A G C A T C A G T A C G T A C T G C T A G C T A G C A G T A C T G A G C T T G C A 1e-6-1.425e+011.06%0.07%23.2bp (27.4bp)Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer(0.627)
More Information | Similar Motifs Found
motif file (matrix)
36 * T C A G A G T C A C T G A T G C T A C G G A C T A C T G A C G T A C T G C A G T T A C G C G A T A C T G A C T G C T A G T A C G 1e-5-1.263e+010.91%0.06%21.4bp (26.8bp)EGR1/MA0162.2/Jaspar(0.604)
More Information | Similar Motifs Found
motif file (matrix)
37 * A C G T C T G A A C G T C G T A A C G T C G T A A C G T G T C A A G C T C G T A 1e-3-7.890e+000.30%0.01%6.8bp (17.9bp)PB0198.1_Zfp128_2/Jaspar(0.869)
More Information | Similar Motifs Found
motif file (matrix)