Information for 4-CAGCAGGTGV (Motif 6)

G A T C C T G A A T C G A T G C C G T A A C T G T A C G C G A T C T A G T A G C
Reverse Opposite:
A T C G A G T C G C T A A T G C A G T C C G A T A T C G A T G C A G C T C T A G
p-value:1e-13
log p-value:-3.146e+01
Information Content per bp:1.692
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif8.89%
Number of Background Sequences with motif1548.2
Percentage of Background Sequences with motif3.26%
Average Position of motif in Targets51.1 +/- 27.0bp
Average Position of motif in Background50.5 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:CAGCAGGTGV--
SDGCAGGTGCNS
 G A T C C T G A A T C G A T G C C G T A A C T G T A C G C G A T C T A G T A G C A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:CAGCAGGTGV-
-NNCAGGTGNN
 G A T C C T G A A T C G A T G C C G T A A C T G T A C G C G A T C T A G T A G C A C G T
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

TCF4/MA0830.1/Jaspar

Match Rank:3
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:CAGCAGGTGV-
-NNCAGGTGCG
 G A T C C T G A A T C G A T G C C G T A A C T G T A C G C G A T C T A G T A G C A C G T
A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:CAGCAGGTGV-
-NNCAGGTGTN
 G A T C C T G A A T C G A T G C C G T A A C T G T A C G C G A T C T A G T A G C A C G T
A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:CAGCAGGTGV
CAGCAGCTGN
 G A T C C T G A A T C G A T G C C G T A A C T G T A C G C G A T C T A G T A G C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-CAGCAGGTGV-
NNVVCAGCTGBN
 A C G T G A T C C T G A A T C G A T G C C G T A A C T G T A C G C G A T C T A G T A G C A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:CAGCAGGTGV-
-GACAGGTGTN
 G A T C C T G A A T C G A T G C C G T A A C T G T A C G C G A T C T A G T A G C A C G T
A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.84
Offset:1
Orientation:forward strand
Alignment:CAGCAGGTGV
-AACAGGTGT
 G A T C C T G A A T C G A T G C C G T A A C T G T A C G C G A T C T A G T A G C
A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

FIGLA/MA0820.1/Jaspar

Match Rank:9
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:CAGCAGGTGV-
-AACAGGTGNT
 G A T C C T G A A T C G A T G C C G T A A C T G T A C G C G A T C T A G T A G C A C G T
A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---CAGCAGGTGV----
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T G A T C C T G A A T C G A T G C C G T A A C T G T A C G C G A T C T A G T A G C A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G