Information for 9-TYTTGATGMATCA (Motif 17)

A C G T G A C T C G A T A C G T A C T G C G T A C G A T C T A G G T A C C G T A A C G T T G A C C G T A
Reverse Opposite:
A C G T A C T G G T C A A C G T A C T G A G T C C G T A A C G T G T A C C G T A C G T A C T G A C G T A
p-value:1e-9
log p-value:-2.261e+01
Information Content per bp:1.791
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.1 +/- 15.2bp
Average Position of motif in Background44.5 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TYTTGATGMATCA
NNNNNATTGATGNGTGN
 A C G T A C G T A C G T A C G T A C G T G A C T C G A T A C G T A C T G C G T A C G A T C T A G G T A C C G T A A C G T T G A C C G T A
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

DMRT3/MA0610.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TYTTGATGMATCA
-NTTGATACATT-
 A C G T G A C T C G A T A C G T A C T G C G T A C G A T C T A G G T A C C G T A A C G T T G A C C G T A
A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TYTTGATGMATCA-
--ATGATKGATGRC
 A C G T G A C T C G A T A C G T A C T G C G T A C G A T C T A G G T A C C G T A A C G T T G A C C G T A A C G T
A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PH0148.1_Pou3f3/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TYTTGATGMATCA---
TNNATTATGCATANNTT
 A C G T A C G T G A C T C G A T A C G T A C T G C G T A C G A T C T A G G T A C C G T A A C G T T G A C C G T A A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TYTTGATGMATCA
---TCATCAATCA
 A C G T G A C T C G A T A C G T A C T G C G T A C G A T C T A G G T A C C G T A A C G T T G A C C G T A
A C G T A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

PB0142.1_Jundm2_2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TYTTGATGMATCA----
-ATTGATGAGTCACCAA
 A C G T G A C T C G A T A C G T A C T G C G T A C G A T C T A G G T A C C G T A A C G T T G A C C G T A A C G T A C G T A C G T A C G T
A C G T T G C A C A G T A C G T C T A G T C G A A G C T A C T G G T C A A T C G G A C T T G A C C T G A A G T C G T A C C T G A G T C A

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TYTTGATGMATCA--
---TGATTRATGGCY
 A C G T G A C T C G A T A C G T A C T G C G T A C G A T C T A G G T A C C G T A A C G T T G A C C G T A A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

Arid3a/MA0151.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TYTTGATGMATCA
-TTTAAT------
 A C G T G A C T C G A T A C G T A C T G C G T A C G A T C T A G G T A C C G T A A C G T T G A C C G T A
A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TYTTGATGMATCA
--MTGATGCAAT-
 A C G T G A C T C G A T A C G T A C T G C G T A C G A T C T A G G T A C C G T A A C G T T G A C C G T A
A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TYTTGATGMATCA
---TGACTCAGCA
 A C G T G A C T C G A T A C G T A C T G C G T A C G A T C T A G G T A C C G T A A C G T T G A C C G T A
A C G T A C G T A C G T A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A