Information for 13-TATTTGCCAD (Motif 7)

C A G T C G T A C G A T A G C T A C G T C T A G G A T C G T A C C G T A C A T G
Reverse Opposite:
G T A C C G A T A C T G C T A G A G T C C G T A C T G A G C T A G C A T G T C A
p-value:1e-11
log p-value:-2.727e+01
Information Content per bp:1.760
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.34%
Number of Background Sequences with motif131.9
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets42.1 +/- 25.7bp
Average Position of motif in Background52.1 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.73
Offset:3
Orientation:forward strand
Alignment:TATTTGCCAD-
---TTGCCAAG
 C A G T C G T A C G A T A G C T A C G T C T A G G A T C G T A C C G T A C A T G A C G T
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TATTTGCCAD
-ARNTGACA-
 C A G T C G T A C G A T A G C T A C G T C T A G G A T C G T A C C G T A C A T G
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TATTTGCCAD-
---YTGWCADY
 C A G T C G T A C G A T A G C T A C G T C T A G G A T C G T A C C G T A C A T G A C G T
A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

Msx3/MA0709.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TATTTGCCAD
NTAATTGN---
 A C G T C A G T C G T A C G A T A G C T A C G T C T A G G A T C G T A C C G T A C A T G
A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TATTTGCCAD
NTAATTGG---
 A C G T C A G T C G T A C G A T A G C T A C G T C T A G G A T C G T A C C G T A C A T G
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T

GBX2/MA0890.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TATTTGCCAD
NNTAATTGNN--
 A C G T A C G T C A G T C G T A C G A T A G C T A C G T C T A G G A T C G T A C C G T A C A T G
T A C G A G T C C G A T T G C A T G C A A C G T A G C T C T A G T A C G A G C T A C G T A C G T

Dlx2/MA0885.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TATTTGCCAD
NTAATTGN---
 A C G T C A G T C G T A C G A T A G C T A C G T C T A G G A T C G T A C C G T A C A T G
C G A T G C A T T G C A C G T A C A G T C A G T C T A G A T G C A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TATTTGCCAD
NNACTTGCCTT
 A C G T C A G T C G T A C G A T A G C T A C G T C T A G G A T C G T A C C G T A C A T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

RAX/MA0718.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TATTTGCCAD
NTTAATTGNN--
 A C G T A C G T C A G T C G T A C G A T A G C T A C G T C T A G G A T C G T A C C G T A C A T G
C T A G G A C T G C A T C G T A C G T A C A G T C G A T C T A G T C A G A G T C A C G T A C G T

HESX1/MA0894.1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TATTTGCCAD
GCTAATTGGC--
 A C G T A C G T C A G T C G T A C G A T A G C T A C G T C T A G G A T C G T A C C G T A C A T G
T C A G G A T C C G A T C T G A T C G A A C G T A G C T C T A G T C A G G A T C A C G T A C G T