Information for 17-ATAGTCACGT (Motif 15)

C G T A C G A T C G T A A C T G C G A T A G T C C G T A T A G C C T A G A C G T
Reverse Opposite:
C G T A A G T C A T C G A C G T A C T G C G T A A G T C A C G T C G T A A C G T
p-value:1e-9
log p-value:-2.300e+01
Information Content per bp:1.866
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif26.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets61.1 +/- 23.8bp
Average Position of motif in Background53.1 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arntl/MA0603.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:ATAGTCACGT--
--GGTCACGTGC
 C G T A C G A T C G T A A C T G C G A T A G T C C G T A T A G C C T A G A C G T A C G T A C G T
A C G T A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:ATAGTCACGT
--AGTCACGC
 C G T A C G A T C G T A A C T G C G A T A G T C C G T A T A G C C T A G A C G T
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

USF1/MA0093.2/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:ATAGTCACGT---
--GGTCACGTGGC
 C G T A C G A T C G T A A C T G C G A T A G T C C G T A T A G C C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

TFEB/MA0692.1/Jaspar

Match Rank:4
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:ATAGTCACGT---
---GTCACGTGAT
 C G T A C G A T C G T A A C T G C G A T A G T C C G T A T A G C C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

BHLHE41/MA0636.1/Jaspar

Match Rank:5
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:ATAGTCACGT---
---GTCACGTGAC
 C G T A C G A T C G T A A C T G C G A T A G T C C G T A T A G C C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---ATAGTCACGT---------
GGAAGAGTCACGTGACCAATAC
 A C G T A C G T A C G T C G T A C G A T C G T A A C T G C G A T A G T C C G T A T A G C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G G C T A C G T A A C T G C T G A C T A G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A A T G C A G T C G T C A T C G A G A C T C G T A G A T C

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ATAGTCACGT---
-BRGTCACGTGAC
 C G T A C G A T C G T A A C T G C G A T A G T C C G T A T A G C C T A G A C G T A C G T A C G T A C G T
A C G T A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.70
Offset:3
Orientation:forward strand
Alignment:ATAGTCACGT-
---GHCACGTG
 C G T A C G A T C G T A A C T G C G A T A G T C C G T A T A G C C T A G A C G T A C G T
A C G T A C G T A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:9
Score:0.70
Offset:3
Orientation:forward strand
Alignment:ATAGTCACGT---
---GTCACGTGGT
 C G T A C G A T C G T A A C T G C G A T A G T C C G T A T A G C C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.69
Offset:2
Orientation:forward strand
Alignment:ATAGTCACGT--
--GGTCACGTGA
 C G T A C G A T C G T A A C T G C G A T A G T C C G T A T A G C C T A G A C G T A C G T A C G T
A C G T A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A