Information for 6-GSCACGCCCCTCC (Motif 7)

A C T G A T C G A G T C T G C A A G T C T A C G A G T C G T A C A G T C A G T C A G C T A G T C G T A C
Reverse Opposite:
A C T G T A C G C T G A A C T G T A C G A C T G A C T G A G T C C T A G A C G T A C T G T A G C A G T C
p-value:1e-12
log p-value:-2.975e+01
Information Content per bp:1.799
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif56.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets56.4 +/- 26.9bp
Average Position of motif in Background42.8 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GSCACGCCCCTCC
GGCCCCGCCCCC--
 A C G T A C T G A T C G A G T C T G C A A G T C T A C G A G T C G T A C A G T C A G T C A G C T A G T C G T A C
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GSCACGCCCCTCC--
GCCCCGCCCCCTCCC
 A C T G A T C G A G T C T G C A A G T C T A C G A G T C G T A C A G T C A G T C A G C T A G T C G T A C A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GSCACGCCCCTCC
GGCCACRCCCMK--
 A C G T A C T G A T C G A G T C T G C A A G T C T A C G A G T C G T A C A G T C A G T C A G C T A G T C G T A C
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T

KLF16/MA0741.1/Jaspar

Match Rank:4
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GSCACGCCCCTCC
GCCACGCCCCC--
 A C T G A T C G A G T C T G C A A G T C T A C G A G T C G T A C A G T C A G T C A G C T A G T C G T A C
T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GSCACGCCCCTCC
GCCMCGCCCMCY-
 A C T G A T C G A G T C T G C A A G T C T A C G A G T C G T A C A G T C A G T C A G C T A G T C G T A C
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T

KLF14/MA0740.1/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GSCACGCCCCTCC
GGCCACGCCCCCTT
 A C G T A C T G A T C G A G T C T G C A A G T C T A C G A G T C G T A C A G T C A G T C A G C T A G T C G T A C
C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GSCACGCCCCTCC
GCCMCRCCCH---
 A C T G A T C G A G T C T G C A A G T C T A C G A G T C G T A C A G T C A G T C A G C T A G T C G T A C
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GSCACGCCCCTCC
NAGCCCCGCCCCCN-
 A C G T A C G T A C T G A T C G A G T C T G C A A G T C T A C G A G T C G T A C A G T C A G T C A G C T A G T C G T A C
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T

SP4/MA0685.1/Jaspar

Match Rank:9
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GSCACGCCCCTCC-
TAAGCCACGCCCCCTTT
 A C G T A C G T A C G T A C T G A T C G A G T C T G C A A G T C T A C G A G T C G T A C A G T C A G T C A G C T A G T C G T A C A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

SP3/MA0746.1/Jaspar

Match Rank:10
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GSCACGCCCCTCC
GCCACGCCCCC--
 A C T G A T C G A G T C T G C A A G T C T A C G A G T C G T A C A G T C A G T C A G C T A G T C G T A C
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C A C G T A C G T