Information for 10-AGCCGTCCGGAGG (Motif 11)

C G T A A C T G A G T C A G T C A C T G A C G T A G T C T G A C A C T G A C T G G T C A A C T G A C T G
Reverse Opposite:
A G T C G T A C A C G T A G T C A G T C A C T G A C T G C G T A G T A C A C T G A C T G A G T C A C G T
p-value:1e-10
log p-value:-2.522e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.8 +/- 10.7bp
Average Position of motif in Background59.2 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0077.1_Spdef_1/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGCCGTCCGGAGG---
AANNATCCGGATGTNN
 C G T A A C T G A G T C A G T C A C T G A C G T A G T C T G A C A C T G A C T G G T C A A C T G A C T G A C G T A C G T A C G T
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C

ETV5/MA0765.1/Jaspar

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AGCCGTCCGGAGG--
-----ACCGGAAGTG
 C G T A A C T G A G T C A G T C A C T G A C G T A G T C T G A C A C T G A C T G G T C A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGCCGTCCGGAGG
--CTGTCTGG---
 C G T A A C T G A G T C A G T C A C T G A C G T A G T C T G A C A C T G A C T G G T C A A C T G A C T G
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

ETV4/MA0764.1/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AGCCGTCCGGAGG--
-----ACCGGAAGTA
 C G T A A C T G A G T C A G T C A C T G A C G T A G T C T G A C A C T G A C T G G T C A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T A G C T G A C A T C G A C T G C T G A G C T A T C A G A G C T C T G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGCCGTCCGGAGG
VBSYGTCTGG---
 C G T A A C T G A G T C A G T C A C T G A C G T A G T C T G A C A C T G A C T G G T C A A C T G A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

ETV1/MA0761.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AGCCGTCCGGAGG--
-----ACCGGAAGTA
 C G T A A C T G A G T C A G T C A C T G A C G T A G T C T G A C A C T G A C T G G T C A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T G A

Gabpa/MA0062.2/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:AGCCGTCCGGAGG----
------CCGGAAGTGGC
 C G T A A C T G A G T C A G T C A C T G A C G T A G T C T G A C A C T G A C T G G T C A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C

FEV/MA0156.2/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGCCGTCCGGAGG--
-----ACCGGAAGTG
 C G T A A C T G A G T C A G T C A C T G A C G T A G T C T G A C A C T G A C T G G T C A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T G A C T G A C C T A G C A T G G C T A G C T A T C A G A G C T C T A G

ELK3/MA0759.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGCCGTCCGGAGG--
-----ACCGGAAGTA
 C G T A A C T G A G T C A G T C A C T G A C G T A G T C T G A C A C T G A C T G G T C A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T G A C T G A C C T A G A C T G T G C A G C T A T C A G A G C T C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------AGCCGTCCGGAGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C A C T G A C G T A G T C T G A C A C T G A C T G G T C A A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C