Information for 15-GAAAYTCCYT (Motif 18)

A C T G G T C A C T G A G T C A G A T C A C G T G A T C A G T C A G C T A G C T
Reverse Opposite:
C T G A C T G A A C T G C T A G G T C A C T A G C A G T G A C T A C G T A G T C
p-value:1e-7
log p-value:-1.717e+01
Information Content per bp:1.679
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif6.17%
Number of Background Sequences with motif1277.2
Percentage of Background Sequences with motif2.68%
Average Position of motif in Targets47.9 +/- 27.4bp
Average Position of motif in Background48.5 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GAAAYTCCYT
GGAAATTCCC-
 A C G T A C T G G T C A C T G A G T C A G A T C A C G T G A T C A G T C A G C T A G C T
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GAAAYTCCYT----
AGAAATGACTTCCCT
 A C G T A C T G G T C A C T G A G T C A G A T C A C G T G A T C A G T C A G C T A G C T A C G T A C G T A C G T A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GAAAYTCCYT
GGAAATTCCC-
 A C G T A C T G G T C A C T G A G T C A G A T C A C G T G A T C A G T C A G C T A G C T
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAAAYTCCYT
GGAAATCCCC-
 A C G T A C T G G T C A C T G A G T C A G A T C A C G T G A T C A G T C A G C T A G C T
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAAAYTCCYT
GGGAAATCCCCN
 A C G T A C G T A C T G G T C A C T G A G T C A G A T C A C G T G A T C A G T C A G C T A G C T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GAAAYTCCYT--
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C T G G T C A C T G A G T C A G A T C A C G T G A T C A G T C A G C T A G C T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAAAYTCCYT
GGAAANCCCC-
 A C G T A C T G G T C A C T G A G T C A G A T C A C G T G A T C A G T C A G C T A G C T
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAAAYTCCYT----
TACGAGACTCCTCTAAC
 A C G T A C G T A C G T A C T G G T C A C T G A G T C A G A T C A C G T G A T C A G T C A G C T A G C T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GAAAYTCCYT-----
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A C T G A G T C A G A T C A C G T G A T C A G T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GAAAYTCCYT
TTCTAGAABNTTCTA
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A C T G A G T C A G A T C A C G T G A T C A G T C A G C T A G C T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A