Information for 13-CGCACTTGGCTCC (Motif 14)

A G T C C T A G A G T C C G T A A G T C A G C T A C G T A C T G A C T G A G T C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C T G A G T C A G T C C G T A C T G A A C T G A C G T A C T G A G T C A C T G
p-value:1e-8
log p-value:-1.927e+01
Information Content per bp:1.940
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 28.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF4/MA0830.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGCACTTGGCTCC
CGCACCTGCT---
 A G T C C T A G A G T C C G T A A G T C A G C T A C G T A C T G A C T G A G T C A C G T A G T C A G T C
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGCACTTGGCTCC
CCTCACCTG-----
 A C G T A G T C C T A G A G T C C G T A A G T C A G C T A C G T A C T G A C T G A G T C A C G T A G T C A G T C
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGCACTTGGCTCC
--CACGTGGC---
 A G T C C T A G A G T C C G T A A G T C A G C T A C G T A C T G A C T G A G T C A C G T A G T C A G T C
A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.63
Offset:8
Orientation:forward strand
Alignment:CGCACTTGGCTCC-
--------GCTCCG
 A G T C C T A G A G T C C G T A A G T C A G C T A C G T A C T G A C T G A G T C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGCACTTGGCTCC
TACACCTGTC---
 A G T C C T A G A G T C C G T A A G T C A G C T A C G T A C T G A C T G A G T C A C G T A G T C A G T C
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGCACTTGGCTCC
-NNACTTGCCTT-
 A G T C C T A G A G T C C G T A A G T C A G C T A C G T A C T G A C T G A G T C A C G T A G T C A G T C
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CGCACTTGGCTCC
NNTNCGCACCTGTNGAN
 A C G T A C G T A C G T A C G T A G T C C T A G A G T C C G T A A G T C A G C T A C G T A C T G A C T G A G T C A C G T A G T C A G T C
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

Creb3l2/MA0608.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGCACTTGGCTCC
-ACACGTGGC---
 A G T C C T A G A G T C C G T A A G T C A G C T A C G T A C T G A C T G A G T C A C G T A G T C A G T C
A C G T G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGCACTTGGCTCC
GTCACGTGGM---
 A G T C C T A G A G T C C G T A A G T C A G C T A C G T A C T G A C T G A G T C A C G T A G T C A G T C
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGCACTTGGCTCC
NNCACCTGNN---
 A G T C C T A G A G T C C G T A A G T C A G C T A C G T A C T G A C T G A G T C A C G T A G T C A G T C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T