Information for 5-GCACAGCTGCTTT (Motif 5)

C T A G A T G C C G T A A G T C G T C A A T C G G T A C A C G T A C T G A T G C A G C T A C G T A C G T
Reverse Opposite:
G T C A T C G A T C G A T A C G G T A C G T C A A C T G A T G C A C G T C T A G G C A T T A C G A G T C
p-value:1e-15
log p-value:-3.615e+01
Information Content per bp:1.769
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets57.7 +/- 23.8bp
Average Position of motif in Background47.7 +/- 16.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GCACAGCTGCTTT
-CGCAGCTGCG--
 C T A G A T G C C G T A A G T C G T C A A T C G G T A C A C G T A C T G A T G C A G C T A C G T A C G T
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.76
Offset:2
Orientation:forward strand
Alignment:GCACAGCTGCTTT
--NCAGCTGCTG-
 C T A G A T G C C G T A A G T C G T C A A T C G G T A C A C G T A C T G A T G C A G C T A C G T A C G T
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GCACAGCTGCTTT
NNACAGCTGC---
 C T A G A T G C C G T A A G T C G T C A A T C G G T A C A C G T A C T G A T G C A G C T A C G T A C G T
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GCACAGCTGCTTT
-AGCAGCTGCTNN
 C T A G A T G C C G T A A G T C G T C A A T C G G T A C A C G T A C T G A T G C A G C T A C G T A C G T
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GCACAGCTGCTTT
-AGCAGCTGCT--
 C T A G A T G C C G T A A G T C G T C A A T C G G T A C A C G T A C T G A T G C A G C T A C G T A C G T
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:6
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GCACAGCTGCTTT
--ACAGCTGTTV-
 C T A G A T G C C G T A A G T C G T C A A T C G G T A C A C G T A C T G A T G C A G C T A C G T A C G T
A C G T A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GCACAGCTGCTTT
--HCAGCTGDTN-
 C T A G A T G C C G T A A G T C G T C A A T C G G T A C A C G T A C T G A T G C A G C T A C G T A C G T
A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GCACAGCTGCTTT
NGNGACAGCTGCN--
 A C G T A C G T C T A G A T G C C G T A A G T C G T C A A T C G G T A C A C G T A C T G A T G C A G C T A C G T A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:GCACAGCTGCTTT
---CAGCTGNT--
 C T A G A T G C C G T A A G T C G T C A A T C G G T A C A C G T A C T G A T G C A G C T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GCACAGCTGCTTT
-AACAGCTGCAG-
 C T A G A T G C C G T A A G T C G T C A A T C G G T A C A C G T A C T G A T G C A G C T A C G T A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T