Information for 3-TRDGYAAACA (Motif 3)

C G A T C T G A C A G T C T A G A G C T G T C A C G T A C T G A A G T C C G T A
Reverse Opposite:
A C G T C T A G G A C T A C G T A C G T C T G A A G T C G T C A G A C T G C T A
p-value:1e-34
log p-value:-7.841e+01
Information Content per bp:1.680
Number of Target Sequences with motif135.0
Percentage of Target Sequences with motif16.00%
Number of Background Sequences with motif755.5
Percentage of Background Sequences with motif4.73%
Average Position of motif in Targets51.8 +/- 23.7bp
Average Position of motif in Background50.6 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:TRDGYAAACA
WAAGTAAAYA
 C G A T C T G A C A G T C T A G A G C T G T C A C G T A C T G A A G T C C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.92
Offset:0
Orientation:forward strand
Alignment:TRDGYAAACA
AAAGTAAACA
 C G A T C T G A C A G T C T A G A G C T G T C A C G T A C T G A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.92
Offset:0
Orientation:forward strand
Alignment:TRDGYAAACA
AAAGTAAACA
 C G A T C T G A C A G T C T A G A G C T G T C A C G T A C T G A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXD2/MA0847.1/Jaspar

Match Rank:4
Score:0.92
Offset:3
Orientation:forward strand
Alignment:TRDGYAAACA
---GTAAACA
 C G A T C T G A C A G T C T A G A G C T G T C A C G T A C T G A A G T C C G T A
A C G T A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:TRDGYAAACA
-AAATAAACA
 C G A T C T G A C A G T C T A G A G C T G T C A C G T A C T G A A G T C C G T A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FOXL1/MA0033.2/Jaspar

Match Rank:6
Score:0.91
Offset:3
Orientation:forward strand
Alignment:TRDGYAAACA
---GTAAACA
 C G A T C T G A C A G T C T A G A G C T G T C A C G T A C T G A A G T C C G T A
A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:7
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--TRDGYAAACA---
NCWRWGTAAACANSV
 A C G T A C G T C G A T C T G A C A G T C T A G A G C T G T C A C G T A C T G A A G T C C G T A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXP3/MA0850.1/Jaspar

Match Rank:8
Score:0.91
Offset:3
Orientation:forward strand
Alignment:TRDGYAAACA
---GTAAACA
 C G A T C T G A C A G T C T A G A G C T G T C A C G T A C T G A A G T C C G T A
A C G T A C G T A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.91
Offset:0
Orientation:forward strand
Alignment:TRDGYAAACA--
TAAGTAAACAAA
 C G A T C T G A C A G T C T A G A G C T G T C A C G T A C T G A A G T C C G T A A C G T A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

FOXA1/MA0148.3/Jaspar

Match Rank:10
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-TRDGYAAACA----
CAAAGTAAACANNNN
 A C G T C G A T C T G A C A G T C T A G A G C T G T C A C G T A C T G A A G T C C G T A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A