Information for 9-HGCAGGTBACAVTGCT (Motif 27)

G C T A T C A G G A T C C G T A C T A G A T C G A C G T A C T G C T G A G T A C C G T A T C G A C G A T A T C G A G T C A C G T
Reverse Opposite:
C G T A C T A G A T G C C G T A A C G T A C G T A C T G A G C T T A G C C G T A A T G C A G T C A C G T C T A G A G T C C A G T
p-value:1e-8
log p-value:-2.011e+01
Information Content per bp:1.763
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.6 +/- 24.6bp
Average Position of motif in Background42.3 +/- 40.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.56
Offset:3
Orientation:forward strand
Alignment:HGCAGGTBACAVTGCT
---AGGTGTCA-----
 G C T A T C A G G A T C C G T A C T A G A T C G A C G T A C T G C T G A G T A C C G T A T C G A C G A T A T C G A G T C A C G T
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.54
Offset:3
Orientation:forward strand
Alignment:HGCAGGTBACAVTGCT--
---AGGTCACCCTGACCT
 G C T A T C A G G A T C C G T A C T A G A T C G A C G T A C T G C T G A G T A C C G T A T C G A C G A T A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.54
Offset:5
Orientation:forward strand
Alignment:HGCAGGTBACAVTGCT------
-----CGAACAGTGCTCACTAT
 G C T A T C A G G A T C C G T A C T A G A T C G A C G T A C T G C T G A G T A C C G T A T C G A C G A T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:HGCAGGTBACAVTGCT
NNCAGGTGNN------
 G C T A T C A G G A T C C G T A C T A G A T C G A C G T A C T G C T G A G T A C C G T A T C G A C G A T A T C G A G T C A C G T
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:HGCAGGTBACAVTGCT
--AAGGTCAC------
 G C T A T C A G G A T C C G T A C T A G A T C G A C G T A C T G C T G A G T A C C G T A T C G A C G A T A T C G A G T C A C G T
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:HGCAGGTBACAVTGCT
AACAGGTGT-------
 G C T A T C A G G A T C C G T A C T A G A T C G A C G T A C T G C T G A G T A C C G T A T C G A C G A T A T C G A G T C A C G T
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:HGCAGGTBACAVTGCT
---ARNTGACA-----
 G C T A T C A G G A T C C G T A C T A G A T C G A C G T A C T G C T G A G T A C C G T A T C G A C G A T A T C G A G T C A C G T
A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-HGCAGGTBACAVTGCT
SDGCAGGTGCNS-----
 A C G T G C T A T C A G G A T C C G T A C T A G A T C G A C G T A C T G C T G A G T A C C G T A T C G A C G A T A T C G A G T C A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---HGCAGGTBACAVTGCT
TCGCGAAGGTTGTACT---
 A C G T A C G T A C G T G C T A T C A G G A T C C G T A C T A G A T C G A C G T A C T G C T G A G T A C C G T A T C G A C G A T A T C G A G T C A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:HGCAGGTBACAVTGCT
---AGGTGTTAAT---
 G C T A T C A G G A T C C G T A C T A G A T C G A C G T A C T G C T G A G T A C C G T A T C G A C G A T A T C G A G T C A C G T
A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T